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Substrate recognition by a bifunctional GH30-7 xylanase B from Talaromyces cellulolyticus.
- Source :
-
FEBS open bio [FEBS Open Bio] 2020 Jun; Vol. 10 (6), pp. 1180-1189. Date of Electronic Publication: 2020 May 22. - Publication Year :
- 2020
-
Abstract
- Xylanase B, a member of subfamily 7 of the GH30 (glycoside hydrolase family 30) from Talaromyces cellulolyticus (TcXyn30B), is a bifunctional enzyme with glucuronoxylanase and xylobiohydrolase activities. In the present study, crystal structures of the native enzyme and the enzyme-product complex of TcXyn30B expressed in Pichia pastoris were determined at resolutions of 1.60 and 1.65 Å, respectively. The enzyme complexed with 2 <superscript>2</superscript> -(4-O-methyl-α-d-glucuronyl)-xylobiose (U <superscript>4m2</superscript> X) revealed that TcXyn30B strictly recognizes both the C-6 carboxyl group and the 4-O-methyl group of the 4-O-methyl-α-d-glucuronyl side chain by the conserved residues in GH30-7 endoxylanases. The crystal structure and site-directed mutagenesis indicated that Asn-93 on the β2-α2-loop interacts with the non-reducing end of the xylose residue at subsite-2 and is likely to be involved in xylobiohydrolase activity. These findings provide structural insight into the mechanisms of substrate recognition of GH30-7 glucuronoxylanase and xylobiohydrolase.<br /> (© 2020 The Authors. Published by FEBS Press and John Wiley & Sons Ltd.)
- Subjects :
- Amino Acid Sequence genetics
Crystallography, X-Ray
Endo-1,4-beta Xylanases genetics
Endo-1,4-beta Xylanases isolation & purification
Endo-1,4-beta Xylanases ultrastructure
Models, Molecular
Mutagenesis, Site-Directed
Protein Conformation, alpha-Helical genetics
Protein Conformation, beta-Strand genetics
Recombinant Proteins genetics
Recombinant Proteins isolation & purification
Recombinant Proteins metabolism
Recombinant Proteins ultrastructure
Saccharomycetales
Sequence Alignment
Substrate Specificity
Endo-1,4-beta Xylanases metabolism
Talaromyces enzymology
Xylans metabolism
Subjects
Details
- Language :
- English
- ISSN :
- 2211-5463
- Volume :
- 10
- Issue :
- 6
- Database :
- MEDLINE
- Journal :
- FEBS open bio
- Publication Type :
- Academic Journal
- Accession number :
- 32359208
- Full Text :
- https://doi.org/10.1002/2211-5463.12873