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A Chromosome-Scale Genome Assembly Resource for Myriosclerotinia sulcatula Infecting Sedge Grass ( Carex sp.).

Authors :
Kusch S
Ibrahim HMM
Zanchetta C
Lopez-Roques C
Donnadieu C
Raffaele S
Source :
Molecular plant-microbe interactions : MPMI [Mol Plant Microbe Interact] 2020 Jul; Vol. 33 (7), pp. 880-883. Date of Electronic Publication: 2020 Jun 01.
Publication Year :
2020

Abstract

The fungus Myriosclerotinia sulcatula is a close relative of the notorious polyphagous plant pathogens Botrytis cinerea and Sclerotinia sclerotiorum but exhibits a host range restricted to plants from the Carex genus ( Cyperaceae family). To date, there are no genomic resources available for fungi in the Myriosclerotinia genus. Here, we present a chromosome-scale reference genome assembly for M. sulcatula . The assembly contains 24 contigs with a total length of 43.53 Mbp, with scaffold N <subscript>50</subscript> of 2,649.7 kbp and N <subscript>90</subscript> of 1,133.1 kbp. BRAKER-predicted gene models were manually curated using WebApollo, resulting in 11,275 protein-coding genes that we functionally annotated. We provide a high-quality reference genome assembly and annotation for M. sulcatula as a resource for studying evolution and pathogenicity in fungi from the Sclerotiniaceae family.

Details

Language :
English
ISSN :
0894-0282
Volume :
33
Issue :
7
Database :
MEDLINE
Journal :
Molecular plant-microbe interactions : MPMI
Publication Type :
Academic Journal
Accession number :
32310704
Full Text :
https://doi.org/10.1094/MPMI-03-20-0060-A