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A Probabilistic Classification Tool for Genetic Subtypes of Diffuse Large B Cell Lymphoma with Therapeutic Implications.
- Source :
-
Cancer cell [Cancer Cell] 2020 Apr 13; Vol. 37 (4), pp. 551-568.e14. - Publication Year :
- 2020
-
Abstract
- The development of precision medicine approaches for diffuse large B cell lymphoma (DLBCL) is confounded by its pronounced genetic, phenotypic, and clinical heterogeneity. Recent multiplatform genomic studies revealed the existence of genetic subtypes of DLBCL using clustering methodologies. Here, we describe an algorithm that determines the probability that a patient's lymphoma belongs to one of seven genetic subtypes based on its genetic features. This classification reveals genetic similarities between these DLBCL subtypes and various indolent and extranodal lymphoma types, suggesting a shared pathogenesis. These genetic subtypes also have distinct gene expression profiles, immune microenvironments, and outcomes following immunochemotherapy. Functional analysis of genetic subtype models highlights distinct vulnerabilities to targeted therapy, supporting the use of this classification in precision medicine trials.<br />Competing Interests: Declaration of Interests G.W.W., D.W.H., and L.M.S. are inventors on an NIH patent application that is based on the work presented herein. D.W.S. was a consultant for Abbvie, Celgene, and Janssen; received research funding from NanoString Technologies, Janssen, and Roche/Genentech. Authors are included on additional patents, some of which are licensed by NanoString Technologies.<br /> (Published by Elsevier Inc.)
- Subjects :
- Animals
Apoptosis
Cell Proliferation
Female
Gene Expression Profiling
Gene Expression Regulation, Neoplastic
Humans
Lymphoma, Large B-Cell, Diffuse drug therapy
Lymphoma, Large B-Cell, Diffuse pathology
Mice
Mice, Inbred NOD
Mice, SCID
Precision Medicine
Tumor Cells, Cultured
Tumor Microenvironment
Xenograft Model Antitumor Assays
Biomarkers, Tumor genetics
Genetic Heterogeneity
Lymphoma, Large B-Cell, Diffuse classification
Lymphoma, Large B-Cell, Diffuse genetics
Molecular Targeted Therapy
Subjects
Details
- Language :
- English
- ISSN :
- 1878-3686
- Volume :
- 37
- Issue :
- 4
- Database :
- MEDLINE
- Journal :
- Cancer cell
- Publication Type :
- Academic Journal
- Accession number :
- 32289277
- Full Text :
- https://doi.org/10.1016/j.ccell.2020.03.015