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Crystal Structure of Keratin 1/10(C401A) 2B Heterodimer Demonstrates a Proclivity for the C-Terminus of Helix 2B to Form Higher Order Molecular Contacts.

Authors :
Lomakin IB
Hinbest AJ
Ho M
Eldirany SA
Bunick CG
Source :
The Yale journal of biology and medicine [Yale J Biol Med] 2020 Mar 27; Vol. 93 (1), pp. 3-17. Date of Electronic Publication: 2020 Mar 27 (Print Publication: 2020).
Publication Year :
2020

Abstract

We previously determined the crystal structure of the wild-type keratin 1/10 helix 2B heterodimer at 3.3 Å resolution. We proposed that the resolution of the diffraction data was limited due to the crystal packing effect from keratin 10 (K10) residue Cys401. Cys401 <superscript>K10</superscript> formed a disulfide-linkage with Cys401 from another K1/10 heterodimer, creating an "X-shaped" structure and a loose crystal packing arrangement. We hypothesized that mutation of Cys401 <superscript>K10</superscript> to alanine would eliminate the disulfide-linkage and improve crystal packing thereby increasing resolution of diffraction and enabling a more accurate side chain electron density map. Indeed, when a K10 Cys401Ala 2B mutant was paired with its native keratin 1 (K1) 2B heterodimer partner its x-ray crystal structure was determined at 2.07 Å resolution; the structure does not contain a disulfide linkage. Superposition of the K1/K10(Cys401Ala) 2B structure onto the wild-type K1/10 2B heterodimer structure had a root-mean-square-deviation of 1.88 Å; the variability in the atomic positions reflects the dynamic motion expected in this filamentous coiled-coil complex. The electrostatic, hydrophobic, and contour features of the molecular surface are similar to the lower resolution wild-type structure. We postulated that elimination of the disulfide linkage in the K1/K10(Cys401Ala) 2B structure could allow for the 2B heterodimers to bind/pack in the A <subscript>22</subscript> tetramer configuration associated with mature keratin intermediate filament assembly. Analysis of the crystal packing revealed a half-staggered anti-parallel tetrameric complex of 2B heterodimers; however, their register is not consistent with models of the A <subscript>22</subscript> mode of tetrameric alignment or prior biochemical cross-linking studies.<br /> (Copyright ©2020, Yale Journal of Biology and Medicine.)

Details

Language :
English
ISSN :
1551-4056
Volume :
93
Issue :
1
Database :
MEDLINE
Journal :
The Yale journal of biology and medicine
Publication Type :
Academic Journal
Accession number :
32226330