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Crystal Structure of Keratin 1/10(C401A) 2B Heterodimer Demonstrates a Proclivity for the C-Terminus of Helix 2B to Form Higher Order Molecular Contacts.
- Source :
-
The Yale journal of biology and medicine [Yale J Biol Med] 2020 Mar 27; Vol. 93 (1), pp. 3-17. Date of Electronic Publication: 2020 Mar 27 (Print Publication: 2020). - Publication Year :
- 2020
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Abstract
- We previously determined the crystal structure of the wild-type keratin 1/10 helix 2B heterodimer at 3.3 Å resolution. We proposed that the resolution of the diffraction data was limited due to the crystal packing effect from keratin 10 (K10) residue Cys401. Cys401 <superscript>K10</superscript> formed a disulfide-linkage with Cys401 from another K1/10 heterodimer, creating an "X-shaped" structure and a loose crystal packing arrangement. We hypothesized that mutation of Cys401 <superscript>K10</superscript> to alanine would eliminate the disulfide-linkage and improve crystal packing thereby increasing resolution of diffraction and enabling a more accurate side chain electron density map. Indeed, when a K10 Cys401Ala 2B mutant was paired with its native keratin 1 (K1) 2B heterodimer partner its x-ray crystal structure was determined at 2.07 Å resolution; the structure does not contain a disulfide linkage. Superposition of the K1/K10(Cys401Ala) 2B structure onto the wild-type K1/10 2B heterodimer structure had a root-mean-square-deviation of 1.88 Å; the variability in the atomic positions reflects the dynamic motion expected in this filamentous coiled-coil complex. The electrostatic, hydrophobic, and contour features of the molecular surface are similar to the lower resolution wild-type structure. We postulated that elimination of the disulfide linkage in the K1/K10(Cys401Ala) 2B structure could allow for the 2B heterodimers to bind/pack in the A <subscript>22</subscript> tetramer configuration associated with mature keratin intermediate filament assembly. Analysis of the crystal packing revealed a half-staggered anti-parallel tetrameric complex of 2B heterodimers; however, their register is not consistent with models of the A <subscript>22</subscript> mode of tetrameric alignment or prior biochemical cross-linking studies.<br /> (Copyright ©2020, Yale Journal of Biology and Medicine.)
- Subjects :
- Amino Acid Sequence physiology
Cytoskeletal Proteins genetics
Cytoskeletal Proteins ultrastructure
Cytoskeleton ultrastructure
Disulfides chemistry
Genetic Linkage
Humans
Keratinocytes ultrastructure
Mutation
Peptide Fragments
Protein Conformation
Intermediate Filaments physiology
Intermediate Filaments ultrastructure
Keratin-1 genetics
Keratin-1 ultrastructure
Subjects
Details
- Language :
- English
- ISSN :
- 1551-4056
- Volume :
- 93
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- The Yale journal of biology and medicine
- Publication Type :
- Academic Journal
- Accession number :
- 32226330