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Streptobacillus canis sp. nov. isolated from a dog.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Apr; Vol. 70 (4), pp. 2648-2656. Date of Electronic Publication: 2020 Mar 25. - Publication Year :
- 2020
-
Abstract
- From a phlegmon in a dog an aerobic and facultatively anaerobic, indole-, oxidase- and catalase-negative, non-motile bacterium was isolated in 2019 in Germany that stained Gram-negative and showed a pleomorphic, rod-shaped, non-spore-forming appearance. Based on the results of 16S rRNA gene sequence analyses, strain IHIT1603-19 <superscript>T</superscript> was assigned to the genus Streptobacillus with sequence similarities of 98.6, 98.0, 97.9, 97.1 and 94.4 % to the type strains of Streptobacillus felis , Streptobacillus notomytis , Streptobacillus ratti , Streptobacillus moniliformis and Streptobacillus hongkongensis , respectively. Strain IHIT1603-19 <superscript>T</superscript> could also clearly be differentiated from other Streptobacillus species by rpoB , groEL and recA gene, nucleotide and amino acid sequence analyses as well as by core genome phylogeny. Regarding DNA-DNA relatedness, strain IHIT1603-19 <superscript>T</superscript> demonstrated an average nucleotide identity of 83.00 and 82.28 % compared to S. felis 131000547 <superscript>T</superscript> and S. moniliformis DSM 12112 <superscript>T</superscript> , respectively. Chemotaxonomic and physiological data of strain IHIT1603-19 <superscript>T</superscript> were in congruence with other closely related members of the family Leptotrichiaceae , represented by highly similar enzyme profiles and fatty acid patterns. MALDI-TOF MS analysis also proved suitable in unequivocally discriminating strain IHIT1603-19 <superscript>T</superscript> from all currently described taxa of the genus Streptobacillus . On the basis of these data, we propose the novel species Streptobacillus canis sp. nov. with the type strain IHIT1603-19 <superscript>T</superscript> (=DSM 110501 <superscript>T</superscript> =CCUG 74118 <superscript>T</superscript> =CIP 111795 <superscript>T</superscript> ). The G+C content of the DNA of the type strain is 26.6 mol%, genome size is 1.60 Mbp.
- Subjects :
- Animals
Bacterial Typing Techniques
Base Composition
DNA, Bacterial genetics
Fatty Acids chemistry
Genes, Bacterial
Germany
Nucleic Acid Hybridization
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Streptobacillus isolation & purification
Dogs microbiology
Phylogeny
Streptobacillus classification
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 70
- Issue :
- 4
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 32209168
- Full Text :
- https://doi.org/10.1099/ijsem.0.004086