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A Novel Susceptibility Locus Near GRIK2 Associated With Erosive Esophagitis in a Korean Cohort.
- Source :
-
Clinical and translational gastroenterology [Clin Transl Gastroenterol] 2020 Mar; Vol. 11 (3), pp. e00145. - Publication Year :
- 2020
-
Abstract
- Introduction: The male-predominant sex difference through the spectrum of erosive esophagitis to Barrett's esophagus is widely known. We conducted a genome-wide association study (GWAS) stratified by sex for identifying factors that can predict the endoscopically diagnosed erosive esophagitis.<br />Methods: Erosive esophagitis was diagnosed by endoscopy and assessed for severity. We identified genetic factors associated with erosive esophagitis that accounted for the sex differences in a cohort of 4,242 participants via a GWAS. After quality control and imputation, genetic associations with erosive esophagitis were investigated by multivariate linear regression in 3,620 subjects. Single-nucleotide polymorphisms (SNPs) with P < 5.0 × 10 were considered significant genome wide, and a genetic risk score was constructed for the prediction of erosive esophagitis risk.<br />Results: Six genome-wide significant SNPs near the GRIK2 gene on chromosome 6 were found to be associated with erosive esophagitis only in male subjects. These were predictive of severity through a genetic risk score (P < 0.05), and the findings were validated in a cohort of 622 subjects (P < 0.05).<br />Discussion: This is the first GWAS of erosive esophagitis, and we identified 6 genome-wide significant SNPs in male subjects. These SNPs could help explain the pathogenesis of erosive esophagitis and contribute to the understanding of sex differences. Further genetic investigation could allow for the prediction of high risk for erosive esophagitis and development of new treatment options.
- Subjects :
- Biomarkers
Case-Control Studies
Esophageal Mucosa diagnostic imaging
Esophageal Mucosa pathology
Esophagitis, Peptic diagnosis
Esophagitis, Peptic genetics
Esophagitis, Peptic pathology
Esophagoscopy
Female
Gastroesophageal Reflux genetics
Genome-Wide Association Study
Humans
Male
Middle Aged
Polymorphism, Single Nucleotide
Predictive Value of Tests
Prevalence
Receptors, Kainic Acid genetics
Republic of Korea epidemiology
Risk Assessment methods
Severity of Illness Index
Sex Factors
GluK2 Kainate Receptor
Chromosomes, Human, Pair 6 genetics
Esophagitis, Peptic epidemiology
Gastroesophageal Reflux complications
Genetic Loci
Genetic Predisposition to Disease
Subjects
Details
- Language :
- English
- ISSN :
- 2155-384X
- Volume :
- 11
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Clinical and translational gastroenterology
- Publication Type :
- Academic Journal
- Accession number :
- 32132452
- Full Text :
- https://doi.org/10.14309/ctg.0000000000000145