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The clinical significance and potential molecular mechanism of integrin subunit beta 4 in laryngeal squamous cell carcinoma.
- Source :
-
Pathology, research and practice [Pathol Res Pract] 2020 Feb; Vol. 216 (2), pp. 152785. Date of Electronic Publication: 2019 Dec 16. - Publication Year :
- 2020
-
Abstract
- The relationship between integrin beta 4 (ITGB4) expression and laryngeal squamous cell carcinoma (LSCC) remains unclarified. The object of the present study was to explore the clinical significance and potential molecular mechanism of ITGB4 in LSCC. The protein level of ITGB4 was significantly higher in 46 LSCC patients than in 26 non-LSCC tissues detected by in-house immunohistochemistry. Consistently, ITGB4 mRNA level was also greatly upregulated based on microarray and RNA-seq data (standard mean difference, SMD = 1.62, 95 % CI: 1.23-2.00). And the area under curves (AUC) of summary receiver operator characteristic (SROC) was 0.87 (95 % CI: 0.84-0.90) based on 172 cases of LSCC and 59 cases of non-cancerous controls. Ninety genes were intersected by the ITGB4 related genes and LSCC differential expressed genes (DEGs) from all available microarray and RNA-seq datasets. Based on Gene Ontology (GO) analysis, the top terms of biological process (BP), cellular component (CC) and molecular function (MF) for the 90 ITGB4 related DEGs were extracellular matrix organization, basement membrane and extracellular matrix structural constituent, respectively. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis showed that ITGB4 related DEGs mainly participated in the pathways of ECM-receptor interaction, Focal adhesion and Small cell lung cancer. Moreover, the Protein-Protein Interaction (PPI) network indicated that ITGA3, ITGA5, ITGB4, MET, LAMA3, and COL4A1 might be the core genes of LSCC development related to ITGB4. In conclusion, high ITGB4 expression may lead to the occurrence and development of LSCC via various signaling pathways.<br />Competing Interests: Declaration of Competing Interest None.<br /> (Copyright © 2019 Elsevier GmbH. All rights reserved.)
- Subjects :
- Carcinoma, Squamous Cell metabolism
Carcinoma, Squamous Cell pathology
Female
Gene Ontology
Humans
Immunohistochemistry
Integrin beta4 genetics
Laryngeal Neoplasms metabolism
Laryngeal Neoplasms pathology
Larynx pathology
Male
Microarray Analysis
Middle Aged
Protein Interaction Mapping
Sequence Analysis, RNA
Carcinoma, Squamous Cell genetics
Gene Expression Regulation, Neoplastic
Integrin beta4 metabolism
Laryngeal Neoplasms genetics
Signal Transduction
Subjects
Details
- Language :
- English
- ISSN :
- 1618-0631
- Volume :
- 216
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- Pathology, research and practice
- Publication Type :
- Academic Journal
- Accession number :
- 31889588
- Full Text :
- https://doi.org/10.1016/j.prp.2019.152785