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Agromyces protaetiae sp. nov., isolated from gut of larva of Protaetia brevitarsis seulensis .

Authors :
Heo J
Hamada M
Tamura T
Saito S
Lee SD
Kim JS
Hong SB
Kwon SW
Kim SJ
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Feb; Vol. 70 (2), pp. 1259-1265.
Publication Year :
2020

Abstract

An actinobacterial strain, designated FW100M-8 <superscript>T</superscript> , was isolated from a gut sample of larva of Protaetia brevitarsis seulensis at the National Institute of Agricultural Sciences, Wanju-gun, South Korea. Cells were Gram-stain-positive, microaerophilic to aerobic, non-spore forming and non-motile. It grew at pH 7.0-9.0 (optimum, pH 8.0), at 15-35 °C (optimum, 28 °C) and 0-3.0 % (w/v) NaCl (optimum, 0 %). According to the 16S rRNA gene analysis, strain FW100M-8 <superscript>T</superscript> shared the highest sequence similarity with Agromyces mediolanus DSM 20152 <superscript>T</superscript> (98.4 %), Agromyces ulmi XIL01 <superscript>T</superscript> (98.3 %), Agromyces indicus NIO-1018 <superscript>T</superscript> (98.3 %), Agromyces soli MJ21 <superscript>T</superscript> (98.3 %), and Agromyces arachidis AK-1 <superscript>T</superscript> (97.9 %). Phylogenetic trees showed that strain FW100M-8 <superscript>T</superscript> fell into the lineage of the genus Agromyces . The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, an unidentified glycolipid and an unidentified lipid. The menaquinones of strain FW100M-8 <superscript>T</superscript> were MK-12 (46 %), MK-11 (36 %), MK-10 (14 %) and MK-13 (4 %). The major fatty acids were anteiso-C <subscript>15 : 0</subscript> , anteiso-C <subscript>17 : 0</subscript> and iso-C <subscript>16 : 0</subscript> . The peptidoglycan type was supposed to be the type B1, comprising d-Ala, d-Glu, Gly and l-A <subscript>2</subscript> bu. The G+C content of the genomic DNA is 70.5 mol%. On the basis of the genotypic and phenotypic data, we conclude that strain FW100M-8 <superscript>T</superscript> represents a novel species of the genus Agromyces , for which the name Agromyces protaetiae sp. nov. is proposed with strain FW100M-8 <superscript>T</superscript> (=KACC 19308 <superscript>T</superscript> =NBRC 113048 <superscript>T</superscript> ) as the type strain.

Details

Language :
English
ISSN :
1466-5034
Volume :
70
Issue :
2
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
31851604
Full Text :
https://doi.org/10.1099/ijsem.0.003908