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Cumulibacter soli sp. nov., isolated from farmland soil.

Authors :
Gao QQ
Jiang WK
Sun GJ
Zhang L
Zhang ML
Liu XA
Ke ZJ
Zhou YD
Hong Q
Xu JH
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Feb; Vol. 70 (2), pp. 1152-1157.
Publication Year :
2020

Abstract

A Gram-stain-positive, strictly aerobic, non-motile, non-spore-forming and rod-shaped bacterium, designated as strain G-1 <superscript>T</superscript> , was isolated from farmland soil sampled in in Fuyang, Anhui Province, PR China. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain G-1 <superscript>T</superscript> was closely related to Cumulibacter manganitolerans 2-36 <superscript>T</superscript> (97.7 % similarity). Strain G-1 <superscript>T</superscript> contained iso-C <subscript>16 : 0</subscript> , C <subscript>17 : 1</subscript> ω6 c , iso-C <subscript>15 : 0</subscript> and iso-C <subscript>14 : 0</subscript> as the predominant fatty acids. The polar lipids of strain G-1 <superscript>T</superscript> were diphosphatidylglycerol, phosphatidylethanolamine, an unidentified phospholipid, an unidentified lipid and two unidentified glycolipids. The predominant respiratory quinone of strain G-1 <superscript>T</superscript> was MK-9(H <subscript>4</subscript> ). The cell wall contained meso -diaminopimelic acid as the diagnostic diamino acid. The G+C content of the genomic DNA based on genome calculations was 64.2 mol%. Average nucleotide identity and the digital DNA-DNA hybridization values for the draft genomes between strain G-1 <superscript>T</superscript> and strain 2-36 <superscript>T</superscript> were 75.7 and 20.2 %, respectively. On the basis of phenotypic and phylogenetic data, strain G-1 <superscript>T</superscript> is considered to represent a novel species of the genus Cumulibacter , for which the name Cumulibacter soli sp. nov. is proposed. The type strain is G-1 <superscript>T</superscript> (=CCTCC AB2019021 <superscript>T</superscript> =KCTC 49258 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
70
Issue :
2
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
31800385
Full Text :
https://doi.org/10.1099/ijsem.0.003893