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Evidence of Robustness in a Two-Component System Using a Synthetic Circuit.

Authors :
Dutta A
Rudra P
Banik SK
Mukhopadhyay J
Source :
Journal of bacteriology [J Bacteriol] 2020 Jan 29; Vol. 202 (4). Date of Electronic Publication: 2020 Jan 29 (Print Publication: 2020).
Publication Year :
2020

Abstract

Variation in the concentration of biological components is inescapable for any cell. Robustness in any biological circuit acts as a cushion against such variation and enables the cells to produce homogeneous output despite the fluctuation. The two-component system (TCS) with a bifunctional sensor kinase (that possesses both kinase and phosphatase activities) is proposed to be a robust circuit. Few theoretical models explain the robustness of a TCS, although the criteria and extent of robustness by these models differ. Here, we provide experimental evidence to validate the extent of the robustness of a TCS signaling pathway. We have designed a synthetic circuit in Escherichia coli using a representative TCS of Mycobacterium tuberculosis , MprAB, and monitored the in vivo output signal by systematically varying the concentration of either of the components or both. We observed that the output of the TCS is robust if the concentration of MprA is above a threshold value. This observation is further substantiated by two in vitro assays, in which we estimated the phosphorylated MprA pool or MprA-dependent transcription yield by varying either of the components of the TCS. This synthetic circuit could be used as a model system to analyze the relationship among different components of gene regulatory networks. IMPORTANCE Robustness in essential biological circuits is an important feature of the living organism. A few pieces of evidence support the existence of robustness in vivo in the two-component system (TCS) with a bifunctional sensor kinase (SK). The assays were done under physiological conditions in which the SK was much lower than the response regulator (RR). Here, using a synthetic circuit, we varied the concentrations of the SK and RR of a representative TCS to monitor output robustness in vivo. In vitro assays were also performed under conditions where the concentration of the SK was greater than that of the RR. Our results demonstrate the extent of output robustness in the TCS signaling pathway with respect to the concentrations of the two components.<br /> (Copyright © 2020 American Society for Microbiology.)

Details

Language :
English
ISSN :
1098-5530
Volume :
202
Issue :
4
Database :
MEDLINE
Journal :
Journal of bacteriology
Publication Type :
Academic Journal
Accession number :
31792012
Full Text :
https://doi.org/10.1128/JB.00672-19