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Azospirillum thermophilum sp. nov., isolated from a hot spring.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Jan; Vol. 70 (1), pp. 550-554. - Publication Year :
- 2020
-
Abstract
- A novel Gram-staining negative, aerobic, motile by flagellum, rod-shaped bacterium, designated CFH 70021 <superscript>T</superscript> was isolated from a hot spring soil sample collected from Tengchong, Yunnan province, PR China. Growth of CFH 70021 <superscript>T</superscript> occurred at 15-50 °C (optimum 50 °C), pH 5.0-7.0 (optimum pH 7.0) and with 0-3.0 % (w/v) NaCl (optimum 0 %, w/v). The genome of CFH 70021 <superscript>T</superscript> consisted of four complete circular chromosomes and five plasmids, the genomic DNA G+C content was 69.3 mol%. Comparison of the 16S rRNA gene sequences indicated that CFH 70021 <superscript>T</superscript> represented a member of the genus Azospirillum and showed close relationship with the type strains of Azospirillum agricola CC-HIH038 <superscript>T</superscript> (97.8 %), Azospirillum rugosum IMMIB AFH-6 <superscript>T</superscript> (97.6 %), Azospirillum doebereinerae GSF71 <superscript>T</superscript> (97.6 %), Azospirillum thiophilum DSM 21654 <superscript>T</superscript> (97.4 %) and Azospirillum picis IMMIB TAR-3 <superscript>T</superscript> (97.2 %). The polar lipids of CFH 70021 <superscript>T</superscript> contained diphosphatidylglycerol, phosphatidylmehtylethanolamine, phosphatidylglycerol, phosphatidylcholine, two aminolipids and an unidentified phospholipid. The predominant cellular fatty acids (>10 %) included C <subscript>19:0</subscript> cyclo ω 8c (11.4 %), C <subscript>16 : 0</subscript> (27.6 %) and summed feature 8 (C <subscript>18:1</subscript> ω7 c /C <subscript>18:1</subscript> ω6 c , 40.9 %). The major isoprenoid quinone was Q-10. On the basis of the low ANIb result (<78 %) and different phenotypic and chemotaxonomic characters, we conclude that strain CFH 70021 <superscript>T</superscript> represents a novel member of the genus Azospirillum , for which the name Azospirillum thermophilum sp. nov. is proposed. The type strain is CFH 70021 <superscript>T</superscript> (=KCTC 62259 <superscript>T</superscript> = CCTCC AB2018121 <superscript>T</superscript> ).
- Subjects :
- Azospirillum isolation & purification
Bacterial Typing Techniques
Base Composition
China
DNA, Bacterial genetics
Fatty Acids chemistry
Nucleic Acid Hybridization
Phospholipids chemistry
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Ubiquinone analogs & derivatives
Ubiquinone chemistry
Azospirillum classification
Hot Springs microbiology
Phylogeny
Soil Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 70
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 31651377
- Full Text :
- https://doi.org/10.1099/ijsem.0.003788