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Association of NLRP1 Coding Polymorphism with Lung Function and Serum IL-1β Concentration in Patients Diagnosed with Chronic Obstructive Pulmonary Disease (COPD).
- Source :
-
Genes [Genes (Basel)] 2019 Oct 09; Vol. 10 (10). Date of Electronic Publication: 2019 Oct 09. - Publication Year :
- 2019
-
Abstract
- Chronic obstructive pulmonary disease (COPD) is a chronic disease characterized by a progressive decline in lung function due to airflow limitation, mainly related to IL-1β-induced inflammation. We have hypothesized that single nucleotide polymorphisms (SNPs) in NLRP genes, coding for key regulators of IL-1β, are associated with pathogenesis and clinical phenotypes of COPD. We recruited 704 COPD individuals and 1238 healthy controls for this study. Twenty non-synonymous SNPs in 10 different NLRP genes were genotyped. Genetic associations were estimated using logistic regression, adjusting for age, gender, and smoking history. The impact of genotypes on patients' overall survival was analyzed with the Kaplan-Meier method with the log-rank test. Serum IL-1β concentration was determined by high sensitivity assay and expression analysis was done by RT-PCR. Decreased lung function, measured by a forced expiratory volume in 1 s (FEV <subscript>1</subscript> % predicted), was significantly associated with the minor allele genotypes (AT + TT) of NLRP1 rs12150220 ( p = 0.0002). The same rs12150220 genotypes exhibited a higher level of serum IL-1β compared to the AA genotype ( p = 0.027) in COPD patients. NLRP8 rs306481 minor allele genotypes (AG + AA) were more common in the Global Initiative for Chronic Obstructive Lung Disease (GOLD) definition of group A ( p = 0.0083). Polymorphisms in NLRP1 (rs12150220; OR = 0.55, p = 0.03) and NLRP4 (rs12462372; OR = 0.36, p = 0.03) were only nominally associated with COPD risk. In conclusion, coding polymorphisms in NLRP1 rs12150220 show an association with COPD disease severity, indicating that the fine-tuning of the NLRP1 inflammasome could be important in maintaining lung tissue integrity and treating the chronic inflammation of airways.<br />Competing Interests: The authors declare no conflict of interest.
- Subjects :
- Adaptor Proteins, Signal Transducing metabolism
Aged
Alleles
Apoptosis Regulatory Proteins metabolism
Case-Control Studies
Female
Forced Expiratory Volume genetics
Gene Frequency genetics
Genetic Association Studies
Genetic Predisposition to Disease genetics
Genotype
Haplotypes genetics
Humans
Interleukin-1beta analysis
Interleukin-1beta blood
Kaplan-Meier Estimate
Lung pathology
Male
Middle Aged
NLR Proteins
Nod Signaling Adaptor Proteins metabolism
Phenotype
Polymorphism, Single Nucleotide genetics
Pulmonary Disease, Chronic Obstructive physiopathology
Respiratory Function Tests methods
Adaptor Proteins, Signal Transducing genetics
Apoptosis Regulatory Proteins genetics
Nod Signaling Adaptor Proteins genetics
Pulmonary Disease, Chronic Obstructive genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2073-4425
- Volume :
- 10
- Issue :
- 10
- Database :
- MEDLINE
- Journal :
- Genes
- Publication Type :
- Academic Journal
- Accession number :
- 31601004
- Full Text :
- https://doi.org/10.3390/genes10100783