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Streptomyces bauhiniae sp. nov., isolated from tree bark of Bauhinia variegata Linn. in Thailand.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Jan; Vol. 70 (1), pp. 228-233. - Publication Year :
- 2020
-
Abstract
- A novel actinomycete strain, Bv016 <superscript>T</superscript> , belonging to the genus Streptomyces , was isolated from the bark of tree, Bauhinia variegata Linn., collected in Thailand. The taxonomic position of the strain was characterized by using a polyphasic approach. ll-Diaminopimelic acid, glucose, mannose, ribose and galactose were detected in its whole-cell hydrolysates. The N -acyl type of muramic acid was acetyl. The strain contained anteiso-C <subscript>15</subscript> <subscript> : </subscript> <subscript>0</subscript> , iso-C <subscript>16</subscript> <subscript> : </subscript> <subscript>0</subscript> , iso-C <subscript>15</subscript> <subscript> : </subscript> <subscript>0</subscript> and iso-C <subscript>14</subscript> <subscript> : </subscript> <subscript>0</subscript> as the major fatty acids and MK-9(H <subscript>8</subscript> ), MK-9(H <subscript>6</subscript> ) and MK-9(H <subscript>4</subscript> ) as the major menaquinones. The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol and phosphatidylinositol mannoside. The strain was closely related to Streptomyces griseoluteus JCM 4041 <superscript>T</superscript> (98.4 %), Streptomyces seoulensis JCM 10116 <superscript>T</superscript> (98.4 %) and Streptomyces recifensis JCM 4408 <superscript>T</superscript> (98.2 %). The draft genome of Bv016 <superscript>T</superscript> was 6.74 Mb with 5949 coding sequences with an average G+C content of 71.7 mol%. The ANIb and ANIm values of strain Bv016 <superscript>T</superscript> were 94.1 and 95.2 %, respectively, and the digital DNA-DNA hybridization value was 60.6 % in comparison with the draft genome of S. griseoluteus JCM 4765 <superscript>T</superscript> . The results of the taxonomic analysis suggested that strain Bv016 <superscript>T</superscript> represented a novel species of the genus Streptomyces for which the name Streptomyces bauhiniae sp. nov. is proposed. The type strain is Bv016 <superscript>T</superscript> (=JCM 33208 <superscript>T</superscript> =TISTR 2645 <superscript>T</superscript> ).
- Subjects :
- Bacterial Typing Techniques
Base Composition
DNA, Bacterial genetics
Diaminopimelic Acid chemistry
Fatty Acids chemistry
Nucleic Acid Hybridization
Phospholipids chemistry
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Soil Microbiology
Streptomyces isolation & purification
Thailand
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Bauhinia microbiology
Phylogeny
Plant Bark microbiology
Streptomyces classification
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 70
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 31592758
- Full Text :
- https://doi.org/10.1099/ijsem.0.003743