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19 F NMR relaxation studies of fluorosubstituted tryptophans.

Authors :
Lu M
Ishima R
Polenova T
Gronenborn AM
Source :
Journal of biomolecular NMR [J Biomol NMR] 2019 Sep; Vol. 73 (8-9), pp. 401-409. Date of Electronic Publication: 2019 Aug 21.
Publication Year :
2019

Abstract

We present <superscript>19</superscript> F longitudinal and transverse relaxation studies for four differently fluorosubstituted L-tryptophans, which carry single F atoms in the indole ring, both in the context of the free amino acid and when located in the cyclophilin A protein. For the free 4F-, 5F-, 6F-, 7F-L-Trp, satisfactory agreement between experimentally measured and calculated relaxation rates was obtained, suggesting that the parameters used for calculating the rates for the indole frame are sufficiently accurate. We also measured and calculated relaxation rates for four differently <superscript>19</superscript> F-tryptophan labeled cyclophilin A proteins, transferring the parameters from the free amino acid to the protein-bound moiety. Our results suggest that <superscript>19</superscript> F relaxation data of the large and rigid indole ring in Trp are only moderately affected by protein motions and provide critical reference points for evaluating fluorine NMR relaxation in the future, especially in fluorotryptophan labeled proteins.

Details

Language :
English
ISSN :
1573-5001
Volume :
73
Issue :
8-9
Database :
MEDLINE
Journal :
Journal of biomolecular NMR
Publication Type :
Academic Journal
Accession number :
31435857
Full Text :
https://doi.org/10.1007/s10858-019-00268-y