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Rapid and Simple Detection of Trichosporon asahii by Optimized Colony PCR.

Authors :
Zhang D
Lu X
Liao Y
Xia Z
Peng Z
Yang X
Yang R
Source :
BioMed research international [Biomed Res Int] 2019 May 14; Vol. 2019, pp. 1803278. Date of Electronic Publication: 2019 May 14 (Print Publication: 2019).
Publication Year :
2019

Abstract

Trichosporon asahii is the major pathogen causing invasive trichosporonosis. Conventional methods of its detection are time-consuming or costly and often require complex DNA extraction and purification steps, which hinders rapid clinical diagnosis. In this study, we evaluated colony PCR, which directly uses colonies or trace clinical samples as the template for amplification, for rapid detection of T. asahii infection. Four methods, namely, direct colony, freeze-thaw, glass beads, and enzymolysis, were compared to select the best DNA extraction strategy. We subsequently designed and screened species-specific primers targeting the intergenic spacer 1 (IGS1) of the ribosomal DNA of T. asahii and used them to detect mock infection clinical samples. The species-specific colony PCR based on glass beads proved advantageous, with short procedure time (154.8 ± 0.6 min), good sensitivity (detection limit, 10 <superscript>2</superscript> CFU/mL), and specificity for T. asahii , indicating that this method can be used for the rapid and simple identification of clinical samples of T. asahii infection.

Details

Language :
English
ISSN :
2314-6141
Volume :
2019
Database :
MEDLINE
Journal :
BioMed research international
Publication Type :
Academic Journal
Accession number :
31218222
Full Text :
https://doi.org/10.1155/2019/1803278