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The transcriptome enables the identification of candidate genes behind medicinal value of Drumstick tree (Moringa oleifera).

Authors :
Pasha SN
Shafi KM
Joshi AG
Meenakshi I
Harini K
Mahita J
Sajeevan RS
Karpe SD
Ghosh P
Nitish S
Gandhimathi A
Mathew OK
Prasanna SH
Malini M
Mutt E
Naika M
Ravooru N
Rao RM
Shingate PN
Sukhwal A
Sunitha MS
Upadhyay AK
Vinekar RS
Sowdhamini R
Source :
Genomics [Genomics] 2020 Jan; Vol. 112 (1), pp. 621-628. Date of Electronic Publication: 2019 Apr 29.
Publication Year :
2020

Abstract

Moringa oleifera is a plant well-known for its nutrition value, drought resistance and medicinal properties. cDNA libraries from five different tissues (leaf, root, stem, seed and flower) of M. oleifera cultivar Bhagya were generated and sequenced. We developed a bioinformatics pipeline to assemble transcriptome, along with the previously published M. oleifera genome, to predict 17,148 gene models. Few candidate genes related to biosynthesis of secondary metabolites, vitamins and ion transporters were identified. Expressions were further confirmed by real-time quantitative PCR experiments for few promising leads. Quantitative estimation of metabolites, as well as elemental analysis, was also carried out to support our observations. Enzymes in the biosynthesis of vitamins and metabolites like quercetin and kaempferol are highly expressed in leaves, flowers and seeds. The expression of iron transporters and calcium storage proteins were observed in root and leaves. In general, leaves retain the highest amount of small molecules of interest.<br /> (Copyright © 2019 Elsevier Inc. All rights reserved.)

Details

Language :
English
ISSN :
1089-8646
Volume :
112
Issue :
1
Database :
MEDLINE
Journal :
Genomics
Publication Type :
Academic Journal
Accession number :
31048014
Full Text :
https://doi.org/10.1016/j.ygeno.2019.04.014