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Evolthon: A community endeavor to evolve lab evolution.

Authors :
Kaminski Strauss S
Schirman D
Jona G
Brooks AN
Kunjapur AM
Nguyen Ba AN
Flint A
Solt A
Mershin A
Dixit A
Yona AH
Csörgő B
Busby BP
Hennig BP
Pál C
Schraivogel D
Schultz D
Wernick DG
Agashe D
Levi D
Zabezhinsky D
Russ D
Sass E
Tamar E
Herz E
Levy ED
Church GM
Yelin I
Nachman I
Gerst JE
Georgeson JM
Adamala KP
Steinmetz LM
Rübsam M
Ralser M
Klutstein M
Desai MM
Walunjkar N
Yin N
Aharon Hefetz N
Jakimo N
Snitser O
Adini O
Kumar P
Soo Hoo Smith R
Zeidan R
Hazan R
Rak R
Kishony R
Johnson S
Nouriel S
Vonesch SC
Foster S
Dagan T
Wein T
Karydis T
Wannier TM
Stiles T
Olin-Sandoval V
Mueller WF
Bar-On YM
Dahan O
Pilpel Y
Source :
PLoS biology [PLoS Biol] 2019 Mar 29; Vol. 17 (3), pp. e3000182. Date of Electronic Publication: 2019 Mar 29 (Print Publication: 2019).
Publication Year :
2019

Abstract

In experimental evolution, scientists evolve organisms in the lab, typically by challenging them to new environmental conditions. How best to evolve a desired trait? Should the challenge be applied abruptly, gradually, periodically, sporadically? Should one apply chemical mutagenesis, and do strains with high innate mutation rate evolve faster? What are ideal population sizes of evolving populations? There are endless strategies, beyond those that can be exposed by individual labs. We therefore arranged a community challenge, Evolthon, in which students and scientists from different labs were asked to evolve Escherichia coli or Saccharomyces cerevisiae for an abiotic stress-low temperature. About 30 participants from around the world explored diverse environmental and genetic regimes of evolution. After a period of evolution in each lab, all strains of each species were competed with one another. In yeast, the most successful strategies were those that used mating, underscoring the importance of sex in evolution. In bacteria, the fittest strain used a strategy based on exploration of different mutation rates. Different strategies displayed variable levels of performance and stability across additional challenges and conditions. This study therefore uncovers principles of effective experimental evolutionary regimens and might prove useful also for biotechnological developments of new strains and for understanding natural strategies in evolutionary arms races between species. Evolthon constitutes a model for community-based scientific exploration that encourages creativity and cooperation.<br />Competing Interests: The authors have declared that no competing interests exist.

Details

Language :
English
ISSN :
1545-7885
Volume :
17
Issue :
3
Database :
MEDLINE
Journal :
PLoS biology
Publication Type :
Academic Journal
Accession number :
30925180
Full Text :
https://doi.org/10.1371/journal.pbio.3000182