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rDolphin: a GUI R package for proficient automatic profiling of 1D 1 H-NMR spectra of study datasets.
- Source :
-
Metabolomics : Official journal of the Metabolomic Society [Metabolomics] 2018 Jan 31; Vol. 14 (3), pp. 24. Date of Electronic Publication: 2018 Jan 31. - Publication Year :
- 2018
-
Abstract
- Introduction: Adoption of automatic profiling tools for <superscript>1</superscript> H-NMR-based metabolomic studies still lags behind other approaches in the absence of the flexibility and interactivity necessary to adapt to the properties of study data sets of complex matrices.<br />Objectives: To provide an open source tool that fully integrates these needs and enables the reproducibility of the profiling process.<br />Methods: rDolphin incorporates novel techniques to optimize exploratory analysis, metabolite identification, and validation of profiling output quality.<br />Results: The information and quality achieved in two public datasets of complex matrices are maximized.<br />Conclusion: rDolphin is an open-source R package ( http://github.com/danielcanueto/rDolphin ) able to provide the best balance between accuracy, reproducibility and ease of use.
Details
- Language :
- English
- ISSN :
- 1573-3890
- Volume :
- 14
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Metabolomics : Official journal of the Metabolomic Society
- Publication Type :
- Academic Journal
- Accession number :
- 30830320
- Full Text :
- https://doi.org/10.1007/s11306-018-1319-y