Back to Search Start Over

Instanton rate constant calculations using interpolated potential energy surfaces in nonredundant, rotationally and translationally invariant coordinates.

Authors :
McConnell SR
Kästner J
Source :
Journal of computational chemistry [J Comput Chem] 2019 Mar 15; Vol. 40 (7), pp. 866-874.
Publication Year :
2019

Abstract

A trivial flaw in the utilization of artificial neural networks in interpolating chemical potential energy surfaces (PES) whose descriptors are Cartesian coordinates is their dependence on simple translations and rotations of the molecule under consideration. A different set of descriptors can be chosen to circumvent this problem, internuclear distances, inverse internuclear distances or z-matrix coordinates are three such descriptors. The objective is to use an interpolated PES in instanton rate constant calculations, hence information on the energy, gradient, and Hessian is required at coordinates in the vicinity of the tunneling path. Instanton theory relies on smoothly fitted Hessians, therefore we use energy, gradients, and Hessians in the training procedure. A major challenge is presented in the proper back-transformation of the output gradients and Hessians from internal coordinates to Cartesian coordinates. We perform comparisons between our method, a previous approach and on-the-fly rate constant calcuations on the hydrogen abstraction from methanol and on the hydrogen addition to isocyanic acid. © 2018Wiley Periodicals, Inc.<br /> (© 2018 Wiley Periodicals, Inc.)

Details

Language :
English
ISSN :
1096-987X
Volume :
40
Issue :
7
Database :
MEDLINE
Journal :
Journal of computational chemistry
Publication Type :
Academic Journal
Accession number :
30677168
Full Text :
https://doi.org/10.1002/jcc.25770