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Paracoccus suum sp. nov., isolated from a pig farm dust collector.

Authors :
Heo J
Cho HY
Kim JS
Hong SB
Kwon SW
Kim SJ
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2019 Apr; Vol. 69 (4), pp. 970-974. Date of Electronic Publication: 2019 Jan 21.
Publication Year :
2019

Abstract

A Gram-stain-negative, strictly aerobic, non-motile, non-spore-forming, coccoid- or short rod-shaped bacterial strain, designated SC2-6 <superscript>T</superscript> , was isolated from a dust collector of a pig farm located in Wanju-gun, Jeollabuk-do, Republic of Korea. Strain SC2-6 <superscript>T</superscript> grew within the ranges of 10-37 °C (28-30 °C, optimally), pH 6.0-10.0 (pH 7.0-8.0, optimally) and 0-3% NaCl (w/v). The 16S rRNA gene sequence similarity of strain SC2-6 <superscript>T</superscript> showed the highest values to Paracoccus kondratievae GBT (96.3%), Paracoccus denitrificans DSM 413 <superscript>T</superscript> (96.3%) and Paracoccus sanguinis 5503 <superscript>T</superscript> (96.1%). The phylogenetic tree based on the 16S rRNA gene sequences revealed that strain SC2-6 <superscript>T</superscript> belonged to the genus Paracoccus and clustered with Paracoccus pacificus F14 <superscript>T</superscript> . The phylogenetic tree based on the rpoD gene sequences also demonstrated that strain SC2-6 <superscript>T</superscript> fell into the clade of the genus Paracoccus. The DNA G+C content was 66.9 mol%. The major respiratory quinone was ubiquinone-10 and the major fatty acids (> 10% of the total fatty acids) were summed feature 8 (comprising C18 : 1 ω6c and/or C18 : 1 ω7c). The polar lipids were composed of diphosphatidylglycerol, phosphatidylcholine, an unidentified glycolipid, two unidentified aminolipids and two unidentified lipids. On the basis of phenotypic, phylogenetic and genomic data, strain SC2-6 <superscript>T</superscript> was classified in the genus Paracoccus as a member of a novel species, for which the name Paracoccus suum sp. nov. is proposed. The type strain is SC2-6 <superscript>T</superscript> (=KACC 19328 <superscript>T</superscript> =NBRC 113110 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
69
Issue :
4
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
30663955
Full Text :
https://doi.org/10.1099/ijsem.0.003226