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Crenobacter cavernae sp. nov., isolated from a karst cave, and emended description of the genus Crenobacter.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2019 Feb; Vol. 69 (2), pp. 476-480. Date of Electronic Publication: 2018 Dec 17. - Publication Year :
- 2019
-
Abstract
- A Gram-stain-negative, rod-shaped, motile and strictly aerobic novel bacterial isolate, designated strain K1W11S-77 <superscript>T</superscript> , was obtained from a water sample that was collected from a karst cave in Guizhou province, PR China. The results of a phylogenetic analysis based on 16S rRNA gene sequences indicated that K1W11S-77 <superscript>T</superscript> represented a member of the genus Crenobacter within the family Neisseriaceae of the phylum Proteobacteria. K1W11S-77 <superscript>T</superscript> was phylogenetically closely related to Crenobacter luteusYIM 78141 <superscript>T</superscript> (Their 16S rRNA gene sequence similarity is 95.02 %). Growth of K1W11S-77 <superscript>T</superscript> occurred at 10-30 °C, at pH 7-9, and in the presence of 0-1 % (w/v) NaCl. The major cellular fatty acids were C12 : 0, C16 : 0, C18:1ω7c and summed feature 3. The major isoprenoid quinone was Q-8. The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol and one unidentified phospholipid. The genome of K1W11S-77 <superscript>T</superscript> was 3.27 Mb long and encoded 3167 annotated genes. The DNA G+C content of the genomic DNA was 65.3 mol%. On the basis of phylogenetic, phenotypic and chemotaxonomic characteristics, K1W11S-77 <superscript>T</superscript> is considered to represent a novel species of the genus Crenobacter, for which the name Crenobactercavernae sp. nov. is proposed. The type strain is K1W11S-77 <superscript>T</superscript> (=CGMCC 1.13527 <superscript>T</superscript> =NBRC 113452 <superscript>T</superscript> ).
- Subjects :
- Bacterial Typing Techniques
Base Composition
China
DNA, Bacterial genetics
Fatty Acids chemistry
Neisseriaceae isolation & purification
Phospholipids chemistry
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Caves microbiology
Neisseriaceae classification
Phylogeny
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 69
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 30556805
- Full Text :
- https://doi.org/10.1099/ijsem.0.003179