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Prediction of HIV Transmission Cluster Growth With Statewide Surveillance Data.
- Source :
-
Journal of acquired immune deficiency syndromes (1999) [J Acquir Immune Defic Syndr] 2019 Feb 01; Vol. 80 (2), pp. 152-159. - Publication Year :
- 2019
-
Abstract
- Background: Prediction of HIV transmission cluster growth may help guide public health action. We developed a predictive model for cluster growth in North Carolina (NC) using routine HIV surveillance data.<br />Methods: We identified putative transmission clusters with ≥2 members through pairwise genetic distances ≤1.5% from HIV-1 pol sequences sampled November 2010-December 2017 in NC. Clusters established by a baseline of January 2015 with any sequences sampled within 2 years before baseline were assessed for growth (new diagnoses) over 18 months. We developed a predictive model for cluster growth incorporating demographic, clinical, temporal, and contact tracing characteristics of baseline cluster members. We internally and temporally externally validated the final model in the periods January 2015-June 2016 and July 2016-December 2017.<br />Results: Cluster growth was predicted by larger baseline cluster size, shorter time between diagnosis and HIV care entry, younger age, shorter time since the most recent HIV diagnosis, higher proportion with no named contacts, and higher proportion with HIV viremia. The model showed areas under the receiver-operating characteristic curves of 0.82 and 0.83 in the internal and temporal external validation samples.<br />Conclusions: The predictive model developed and validated here is a novel means of identifying HIV transmission clusters that may benefit from targeted HIV control resources.
- Subjects :
- Adult
Cluster Analysis
Epidemiological Monitoring
Female
HIV Infections genetics
HIV Infections virology
Humans
Male
Middle Aged
Molecular Epidemiology
North Carolina epidemiology
Phylogeny
Sequence Analysis, DNA
Sexual Behavior
Young Adult
HIV genetics
HIV Infections transmission
Population Surveillance
pol Gene Products, Human Immunodeficiency Virus genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1944-7884
- Volume :
- 80
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- Journal of acquired immune deficiency syndromes (1999)
- Publication Type :
- Academic Journal
- Accession number :
- 30422907
- Full Text :
- https://doi.org/10.1097/QAI.0000000000001905