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Streptomyces desertarenae sp. nov., a novel actinobacterium isolated from a desert sample.
- Source :
-
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2019 Mar; Vol. 112 (3), pp. 367-374. Date of Electronic Publication: 2018 Sep 17. - Publication Year :
- 2019
-
Abstract
- A Streptomyces isolate, designated strain SYSU D8023 <superscript>T</superscript> , was isolated from a desert sand sample collected from Gurbantunggut desert, China. The characterisation of the isolate was achieved using a polyphasic taxonomic approach. The isolate was found to be Gram-positive and aerobic. The strain was found to be able to grow at 14-50 °C, pH 6.0-9.0 and in the presence of up to 7% (w/v) NaCl. Strain SYSU D8023 <superscript>T</superscript> contains LL-diaminopimelic acid as a cell wall diamino acid. The polar lipids were identified as diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannoside, an unidentified glycolipid and an unidentified phospholipid. MK-9(H <subscript>6</subscript> ) and MK-9(H <subscript>8</subscript> ) were detected as the respiratory quinones, and anteiso-C <subscript>15:0</subscript> , iso-C <subscript>16:0</subscript> and anteiso-C <subscript>17:0</subscript> as the predominant fatty acids. Pairwise comparison of the 16S rRNA gene sequences indicated that strain SYSU D8023 <superscript>T</superscript> has a sequence identity of 97.9% to Streptomyces barkulensis RC 1831 <superscript>T</superscript> . The DNA G + C content of strain SYSU D8023 <superscript>T</superscript> was determined to be 70.1 mol%. Based on the analyses of the phenotypic, genotypic and phylogenetic characteristics, strain SYSU D8023 <superscript>T</superscript> was concluded to represent a novel species of the genus Streptomyces, for which the name Streptomyces desertarenae sp. nov. is proposed. The type strain of the species is SYSU D8023 <superscript>T</superscript> (= CGMCC 4.7455 <superscript>T</superscript> = KCTC 49023 <superscript>T</superscript> ).
- Subjects :
- Aerobiosis
Base Composition
Cell Wall chemistry
China
Cytosol chemistry
Desert Climate
Diaminopimelic Acid analysis
Fatty Acids analysis
Glycolipids analysis
Hydrogen-Ion Concentration
Phospholipids analysis
Phylogeny
Quinones analysis
RNA, Ribosomal, 16S genetics
Sequence Homology, Nucleic Acid
Sodium Chloride metabolism
Streptomyces genetics
Streptomyces physiology
Temperature
Soil Microbiology
Streptomyces classification
Streptomyces isolation & purification
Subjects
Details
- Language :
- English
- ISSN :
- 1572-9699
- Volume :
- 112
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Antonie van Leeuwenhoek
- Publication Type :
- Academic Journal
- Accession number :
- 30225544
- Full Text :
- https://doi.org/10.1007/s10482-018-1163-0