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A new algorithm for high-resolution reconstruction of single particles by electron microscopy.

Authors :
Sorzano COS
Vargas J
de la Rosa-Trevín JM
Jiménez A
Maluenda D
Melero R
Martínez M
Ramírez-Aportela E
Conesa P
Vilas JL
Marabini R
Carazo JM
Source :
Journal of structural biology [J Struct Biol] 2018 Nov; Vol. 204 (2), pp. 329-337. Date of Electronic Publication: 2018 Aug 24.
Publication Year :
2018

Abstract

The Map Challenge organized by the Electron Microscopy Data Bank has prompted the development of an Xmipp high resolution reconstruction protocol (which we will refer to as highres) that is integrated in the software platform Scipion. In this work we describe the details of the image angular alignment and map reconstruction steps in our new method. This algorithm is similar to the standard projection matching approach with some important modifications, especially in the area of detecting significant features in the reconstructed volume. We show that the new method is able to produce higher resolution maps than the current de facto standard as measured by the Fourier Shell Correlation, the Monogenic Local Resolution and EMRinger.<br /> (Copyright © 2018 Elsevier Inc. All rights reserved.)

Details

Language :
English
ISSN :
1095-8657
Volume :
204
Issue :
2
Database :
MEDLINE
Journal :
Journal of structural biology
Publication Type :
Academic Journal
Accession number :
30145327
Full Text :
https://doi.org/10.1016/j.jsb.2018.08.002