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Amino acid position 37 of HLA-DRβ1 affects susceptibility to Crohn's disease in Asians.
- Source :
-
Human molecular genetics [Hum Mol Genet] 2018 Nov 15; Vol. 27 (22), pp. 3901-3910. - Publication Year :
- 2018
-
Abstract
- Crohn's disease (CD) and ulcerative colitis (UC) are the major types of chronic inflammatory bowel disease (IBD) characterized by recurring episodes of inflammation of the gastrointestinal tract. Although it is well established that human leukocyte antigen (HLA) is a major risk factor for IBD, it is yet to be determined which HLA alleles or amino acids drive the risks of CD and UC in Asians. To define the roles of HLA for IBD in Asians, we fine-mapped HLA in 12 568 individuals from Korea and Japan (3294 patients with CD, 1522 patients with UC and 7752 controls). We identified that the amino acid position 37 of HLA-DRβ1 plays a key role in the susceptibility to CD (presence of serine being protective, P = 3.6 × 10-67, OR = 0.48 [0.45-0.52]). For UC, we confirmed the known association of the haplotype spanning HLA-C*12:02, HLA-B*52:01 and HLA-DRB1*1502 (P = 1.2 × 10-28, OR = 4.01 [3.14-5.12]).
- Subjects :
- Alleles
Amino Acid Substitution genetics
Amino Acids chemistry
Amino Acids genetics
Asian People genetics
Colitis, Ulcerative pathology
Crohn Disease pathology
Female
Genetic Association Studies
Genotype
HLA-DRB1 Chains chemistry
Haplotypes genetics
Humans
Inflammatory Bowel Diseases pathology
Japan
Male
Protein Conformation
Republic of Korea
Colitis, Ulcerative genetics
Crohn Disease genetics
Genetic Predisposition to Disease
HLA-DRB1 Chains genetics
Inflammatory Bowel Diseases genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1460-2083
- Volume :
- 27
- Issue :
- 22
- Database :
- MEDLINE
- Journal :
- Human molecular genetics
- Publication Type :
- Academic Journal
- Accession number :
- 30084967
- Full Text :
- https://doi.org/10.1093/hmg/ddy285