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Amino acid position 37 of HLA-DRβ1 affects susceptibility to Crohn's disease in Asians.

Authors :
Han B
Akiyama M
Kim KK
Oh H
Choi H
Lee CH
Jung S
Lee HS
Kim EE
Cook S
Haritunians T
Yamazaki K
Park SH
Ye BD
McGovern DPB
Esaki M
Kawaguchi T
Khor SS
Taylor KD
Rotter JI
Suzuki Y
Matsui T
Motoya S
Bang SY
Kim TH
Momozawa Y
Kamatani Y
Tokunaga K
Kubo M
Okada Y
Yang SK
Song K
Source :
Human molecular genetics [Hum Mol Genet] 2018 Nov 15; Vol. 27 (22), pp. 3901-3910.
Publication Year :
2018

Abstract

Crohn's disease (CD) and ulcerative colitis (UC) are the major types of chronic inflammatory bowel disease (IBD) characterized by recurring episodes of inflammation of the gastrointestinal tract. Although it is well established that human leukocyte antigen (HLA) is a major risk factor for IBD, it is yet to be determined which HLA alleles or amino acids drive the risks of CD and UC in Asians. To define the roles of HLA for IBD in Asians, we fine-mapped HLA in 12 568 individuals from Korea and Japan (3294 patients with CD, 1522 patients with UC and 7752 controls). We identified that the amino acid position 37 of HLA-DRβ1 plays a key role in the susceptibility to CD (presence of serine being protective, P = 3.6 × 10-67, OR = 0.48 [0.45-0.52]). For UC, we confirmed the known association of the haplotype spanning HLA-C*12:02, HLA-B*52:01 and HLA-DRB1*1502 (P = 1.2 × 10-28, OR = 4.01 [3.14-5.12]).

Details

Language :
English
ISSN :
1460-2083
Volume :
27
Issue :
22
Database :
MEDLINE
Journal :
Human molecular genetics
Publication Type :
Academic Journal
Accession number :
30084967
Full Text :
https://doi.org/10.1093/hmg/ddy285