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Complete genome sequence of an African swine fever virus (ASFV POL/2015/Podlaskie) determined directly from pig erythrocyte-associated nucleic acid.

Authors :
Olesen AS
Lohse L
Dalgaard MD
Woźniakowski G
Belsham GJ
Bøtner A
Rasmussen TB
Source :
Journal of virological methods [J Virol Methods] 2018 Nov; Vol. 261, pp. 14-16. Date of Electronic Publication: 2018 Jul 29.
Publication Year :
2018

Abstract

African swine fever (ASF) is an important disease of domestic pigs and wild boar. The disease is caused by African swine fever virus (ASFV). In 2014, ASFV was introduced into Eastern Europe, and it has since then continued to spread within various Eastern European countries. Investigating differences in sequences between ASFV isolates may be a valuable tool to understand differences in virulence among them, however currently, no complete genome sequences of the viruses responsible for the Eastern European outbreaks have been reported. In this study, the complete genome sequence of a highly virulent ASFV was determined directly from erythrocyte-associated nucleic acids obtained from a pig experimentally infected with an isolate from Poland (ASFV POL/2015/Podlaskie). The sequence (ca. 189 kb) of this recent European ASFV showed 95 nt differences (99.95% identity) from the ASFV Georgia 2007/1 genome. The complete sequence of ASFV POL/2015/Podlaskie should assist further studies on the genetic diversity and evolution of the European ASFVs.<br /> (Copyright © 2018 Elsevier B.V. All rights reserved.)

Details

Language :
English
ISSN :
1879-0984
Volume :
261
Database :
MEDLINE
Journal :
Journal of virological methods
Publication Type :
Academic Journal
Accession number :
30063908
Full Text :
https://doi.org/10.1016/j.jviromet.2018.07.015