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Prevalence of Porcine teschovirus genotypes in Hunan, China: identification of novel viral species and genotypes.
- Source :
-
The Journal of general virology [J Gen Virol] 2018 Sep; Vol. 99 (9), pp. 1261-1267. Date of Electronic Publication: 2018 Jul 30. - Publication Year :
- 2018
-
Abstract
- Porcine teschovirus (PTV) comprises at least 13 genotypes (PTV 1-13). Here, the genotypes of field strains prevalent among pig populations in Hunan Province, China, were identified. Multiple PTV genotypes, including all genotypes except PTV 7 and 8, were found co-circulating in the pig populations, reflecting a high genetic diversity. Moreover, we identified nine novel PTV genotypes, provisionally designated as PTV 14-22. PTV 21-HuN41 and PTV 21-HuN42 were successfully isolated, and their nearly complete genomes were sequenced. Homology comparison of the polyprotein genes of PTV 21-HuN41-42 to those of other known PTVs revealed low identities, ranging from 70.1 to 71.9 % (nucleotide identity) and 75.4 to 77.6 % (amino acid identity). Moreover, PTV 21-HuN41-42 were identified as a novel teschovirus species (tentatively Teschovirus B), based on the analyses of phylogenetics and evolutionary divergence. The findings of this study are expected to greatly enrich our knowledge of PTV genotypes.
- Subjects :
- Animals
Capsid Proteins genetics
Capsid Proteins metabolism
China epidemiology
Evolution, Molecular
Gene Expression Regulation, Viral
Genotype
Phylogeny
Picornaviridae Infections virology
Swine
Swine Diseases epidemiology
Teschovirus isolation & purification
Picornaviridae Infections veterinary
Swine Diseases virology
Teschovirus genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1465-2099
- Volume :
- 99
- Issue :
- 9
- Database :
- MEDLINE
- Journal :
- The Journal of general virology
- Publication Type :
- Academic Journal
- Accession number :
- 30058997
- Full Text :
- https://doi.org/10.1099/jgv.0.001129