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Comparison of Different Classifiers with Active Learning to Support Quality Control in Nucleus Segmentation in Pathology Images.

Authors :
Wen S
Kurc TM
Hou L
Saltz JH
Gupta RR
Batiste R
Zhao T
Nguyen V
Samaras D
Zhu W
Source :
AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science [AMIA Jt Summits Transl Sci Proc] 2018 May 18; Vol. 2017, pp. 227-236. Date of Electronic Publication: 2018 May 18 (Print Publication: 2018).
Publication Year :
2018

Abstract

Segmentation of nuclei in whole slide tissue images is a common methodology in pathology image analysis. Most segmentation algorithms are sensitive to input algorithm parameters and the characteristics of input images (tissue morphology, staining, etc.). Because there can be large variability in the color, texture, and morphology of tissues within and across cancer types (heterogeneity can exist even within a tissue specimen), it is likely that a set of input parameters will not perform well across multiple images. It is, therefore, highly desired, and necessary in some cases, to carry out a quality control of segmentation results. This work investigates the application of machine learning in this process. We report on the application of active learning for segmentation quality assessment for pathology images and compare three classification methods, Support Vector Machine (SVM), Random Forest (RF) and Convolutional Neural Network (CNN), for their performance improvement and efficiency.

Details

Language :
English
ISSN :
2153-4063
Volume :
2017
Database :
MEDLINE
Journal :
AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science
Publication Type :
Academic Journal
Accession number :
29888078