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Identification of Enzymes Involved in Sesterterpene Biosynthesis in Marine Fungi.
- Source :
-
Methods in enzymology [Methods Enzymol] 2018; Vol. 604, pp. 441-498. Date of Electronic Publication: 2018 May 02. - Publication Year :
- 2018
-
Abstract
- Diverse and bioactive terpene compounds are produced by marine fungi. The biosynthesis of sesterterpene molecules containing a C25 skeleton is catalyzed by chimeric enzymes that carry out both chain elongation and terpene cyclization reactions. These bifunctional characteristics facilitate using different chain length polyisoprenoid diphosphates as precursors to yield the geranylfarnesyl diphosphate intermediate, which is then converted to a sesterterpene in one step. In this chapter, we describe the identification of sesterterpene synthase enzymes, together with other related enzymes such as diterpene and farnesyl diphosphate synthases, in a single fungal strain. The processes are based on genome sequencing, in silico analysis of terpene synthase, in vivo gene (cluster) deletion and complementation, and in vitro protein function verification, together with the methods of detecting terpenes using high-performance liquid chromatography (HPLC) and gas chromatography-mass spectrometry (GC-MS).<br /> (© 2018 Elsevier Inc. All rights reserved.)
- Subjects :
- Alkyl and Aryl Transferases chemistry
Alkyl and Aryl Transferases genetics
Aspergillus enzymology
Aspergillus genetics
Chromatography, High Pressure Liquid methods
Cloning, Molecular methods
Computational Biology methods
Computer Simulation
Fungal Proteins genetics
Gas Chromatography-Mass Spectrometry methods
Gene Targeting methods
Geranyltranstransferase metabolism
Multigene Family
Polycyclic Sesquiterpenes
Sesquiterpenes analysis
Sesterterpenes analysis
Alkyl and Aryl Transferases metabolism
Fungal Proteins metabolism
Fungi enzymology
Genomics methods
Sesterterpenes biosynthesis
Subjects
Details
- Language :
- English
- ISSN :
- 1557-7988
- Volume :
- 604
- Database :
- MEDLINE
- Journal :
- Methods in enzymology
- Publication Type :
- Academic Journal
- Accession number :
- 29779663
- Full Text :
- https://doi.org/10.1016/bs.mie.2018.04.023