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Involvement of conformational isomerism in the complexity of the crystal network of 1-(4-nitrophenyl)-1H-1,3-benzimidazole derivatives driven by C-H...A (A = NO 2 , N py and π) and orthogonal N py ...NO 2 and ONO...Csp 2 interactions.

Authors :
García-Aranda MI
Gómez-Castro CZ
García-Báez EV
Gómez YGY
Castrejón-Flores JL
Padilla-Martínez II
Source :
Acta crystallographica. Section C, Structural chemistry [Acta Crystallogr C Struct Chem] 2018 Apr 01; Vol. 74 (Pt 4), pp. 428-436. Date of Electronic Publication: 2018 Mar 07.
Publication Year :
2018

Abstract

A detailed structural analysis of the benzimidazole nitroarenes 1-(4-nitrophenyl)-1H-1,3-benzimidazole, C <subscript>13</subscript> H <subscript>9</subscript> N <subscript>3</subscript> O <subscript>2</subscript> , (I), 1-(4-nitrophenyl)-2-phenyl-1H-1,3-benzimidazole, C <subscript>19</subscript> H <subscript>13</subscript> N <subscript>3</subscript> O <subscript>2</subscript> , (II), and 2-(3-methylphenyl)-1-(4-nitrophenyl)-1H-1,3-benzimidazole, C <subscript>20</subscript> H <subscript>15</subscript> N <subscript>3</subscript> O <subscript>2</subscript> , (III), has been performed. They are nonplanar structures whose crystal arrangement is governed by Csp <superscript>2</superscript> -H...A (A = NO <subscript>2</subscript> , N <subscript>py</subscript> and π) hydrogen bonding. The inherent complexity of the supramolecular arrangements of compounds (I) (Z' = 2) and (II) (Z' = 4) into tapes, helices and sheets is the result of the additional participation of π-π <subscript>NO2</subscript> and n-π* (n = O and N <subscript>py</subscript> ; π* = Csp <superscript>2</superscript> and N <subscript>NO2</subscript> ) interactions that contribute to the stabilization of the equi-energetic conformations adopted by each of the independent molecules in the asymmetric unit. In contrast, compound (III) (Z' = 1) is self-paired, probably due to the effect of the steric demand of the methyl group on the crystal packing. Theoretical ab initio calculations confirmed that the presence of the arene ring at the benzimidazole 2-position increases the rotational barrier of the nitrobenzene ring and also supports the electrostatic nature of the orthogonal ONO...Csp <superscript>2</superscript> and N <subscript>py</subscript> ...NO <subscript>2</subscript> interactions.

Details

Language :
English
ISSN :
2053-2296
Volume :
74
Issue :
Pt 4
Database :
MEDLINE
Journal :
Acta crystallographica. Section C, Structural chemistry
Publication Type :
Academic Journal
Accession number :
29620026
Full Text :
https://doi.org/10.1107/S2053229618003406