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The effect of tides on nearshore environmental DNA.

Authors :
Kelly RP
Gallego R
Jacobs-Palmer E
Source :
PeerJ [PeerJ] 2018 Mar 19; Vol. 6, pp. e4521. Date of Electronic Publication: 2018 Mar 19 (Print Publication: 2018).
Publication Year :
2018

Abstract

We can recover genetic information from organisms of all kinds using environmental sampling. In recent years, sequencing this environmental DNA (eDNA) has become a tractable means of surveying many species using water, air, or soil samples. The technique is beginning to become a core tool for ecologists, environmental scientists, and biologists of many kinds, but the temporal resolution of eDNA sampling is often unclear, limiting the ecological interpretations of the resulting datasets. Here, in a temporally and spatially replicated field study using ca. 313 bp of eukaryotic COI mtDNA as a marker, we find that nearshore organismal communities are largely consistent across tides. Our findings suggest that nearshore eDNA from both benthic and planktonic taxa tends to be endogenous to the site and water mass sampled, rather than changing with each tidal cycle. However, where physiochemical water mass characteristics change, we find that the relative contributions of a broad range of organisms to eDNA communities shift in concert.<br />Competing Interests: The authors declare there are no competing interests.

Details

Language :
English
ISSN :
2167-8359
Volume :
6
Database :
MEDLINE
Journal :
PeerJ
Publication Type :
Academic Journal
Accession number :
29576982
Full Text :
https://doi.org/10.7717/peerj.4521