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Mass spectrometry and multivariate analysis to classify cervical intraepithelial neoplasia from blood plasma: an untargeted lipidomic study.
- Source :
-
Scientific reports [Sci Rep] 2018 Mar 02; Vol. 8 (1), pp. 3954. Date of Electronic Publication: 2018 Mar 02. - Publication Year :
- 2018
-
Abstract
- Cervical cancer is still an important issue of public health since it is the fourth most frequent type of cancer in women worldwide. Much effort has been dedicated to combating this cancer, in particular by the early detection of cervical pre-cancerous lesions. For this purpose, this paper reports the use of mass spectrometry coupled with multivariate analysis as an untargeted lipidomic approach to classifying 76 blood plasma samples into negative for intraepithelial lesion or malignancy (NILM, nā=ā42) and squamous intraepithelial lesion (SIL, nā=ā34). The crude lipid extract was directly analyzed with mass spectrometry for untargeted lipidomics, followed by multivariate analysis based on the principal component analysis (PCA) and genetic algorithm (GA) with support vector machines (SVM), linear (LDA) and quadratic (QDA) discriminant analysis. PCA-SVM models outperformed LDA and QDA results, achieving sensitivity and specificity values of 80.0% and 83.3%, respectively. Five types of lipids contributing to the distinction between NILM and SIL classes were identified, including prostaglandins, phospholipids, and sphingolipids for the former condition and Tetranor-PGFM and hydroperoxide lipid for the latter. These findings highlight the potentiality of using mass spectrometry associated with chemometrics to discriminate between healthy women and those suffering from cervical pre-cancerous lesions.
- Subjects :
- Adult
Case-Control Studies
Female
Humans
Multivariate Analysis
Principal Component Analysis
Sensitivity and Specificity
Support Vector Machine
Uterine Cervical Dysplasia blood
Uterine Cervical Dysplasia diagnosis
Lipid Metabolism
Mass Spectrometry methods
Uterine Cervical Dysplasia pathology
Subjects
Details
- Language :
- English
- ISSN :
- 2045-2322
- Volume :
- 8
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Scientific reports
- Publication Type :
- Academic Journal
- Accession number :
- 29500376
- Full Text :
- https://doi.org/10.1038/s41598-018-22317-6