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Lysobacter tongrenensis sp. nov., isolated from soil of a manganese factory.
- Source :
-
Archives of microbiology [Arch Microbiol] 2018 Apr; Vol. 200 (3), pp. 439-444. Date of Electronic Publication: 2017 Nov 29. - Publication Year :
- 2018
-
Abstract
- A Gram-staining negative, aerobic, non-motile, rod-shaped bacterial strain, designated YS-37 <superscript>T</superscript> , was isolated from soil in a manganese factory, People's Republic of China. Based on16S rRNA gene sequence analysis, strain YS-37 <superscript>T</superscript> was most closely related to Lysobacter pocheonensis Gsoil 193 <superscript>T</superscript> (97.0%), Lysobacter dokdonensis DS-58 <superscript>T</superscript> (96.0%) and Lysobacter daecheongensis Dae08 <superscript>T</superscript> (95.8%) and grouped together with L. pocheonensis Gsoil 193 <superscript>T</superscript> and Lysobacter dokdonensis DS-58 <superscript>T</superscript> . The DNA-DNA hybridization value between strain YS-37 <superscript>T</superscript> and L. pocheonensis KCTC 12624 <superscript>T</superscript> was 43.3% (± 1). The major respiratory quinone of strain YS-37 <superscript>T</superscript> was ubiquinone-8, and the polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phospholipid, phosphatidylmethylethaolamine and two unknown lipids. Its major cellular fatty acids (> 5%) were iso-C <subscript>15:0</subscript> , iso-C <subscript>17:1</subscript> ω9c, iso-C <subscript>16:0</subscript> , iso-C <subscript>11:0</subscript> 3-OH and iso-C <subscript>11:0</subscript> and the G + C content of the genomic DNA was 67.1 mol%. Strain YS-37 <superscript>T</superscript> also showed some biophysical and biochemical differences with the related strains, especially in hydrolysis of casein. The results demonstrated that strain YS-37 <superscript>T</superscript> belongs to genus Lysobacter and represents a novel Lysobacter species for which the name Lysobacter tongrenensis sp. nov. is proposed. The type strain is YS-37 <superscript>T</superscript> (= CCTCC AB 2016052 <superscript>T</superscript> = KCTC 52206 <superscript>T</superscript> ).
- Subjects :
- Base Composition
Chemical Industry
China
DNA, Bacterial genetics
Fatty Acids analysis
Fatty Acids chemistry
Lysobacter chemistry
Lysobacter classification
Lysobacter genetics
Manganese chemistry
Molecular Typing
Phospholipids analysis
Phospholipids chemistry
Phylogeny
RNA, Ribosomal, 16S genetics
Soil chemistry
Soil Pollutants chemistry
Ubiquinone chemistry
Lysobacter isolation & purification
Soil Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1432-072X
- Volume :
- 200
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Archives of microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 29188343
- Full Text :
- https://doi.org/10.1007/s00203-017-1457-z