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Quantitative image analysis of protein expression and colocalisation in skin sections.
- Source :
-
Experimental dermatology [Exp Dermatol] 2018 Feb; Vol. 27 (2), pp. 196-199. Date of Electronic Publication: 2018 Jan 09. - Publication Year :
- 2018
-
Abstract
- Immunofluorescence (IF) and in situ proximity ligation assay (isPLA) are techniques that are used for in situ protein expression and colocalisation analysis, respectively. However, an efficient quantitative method to analyse both IF and isPLA staining on skin sections is lacking. Therefore, we developed a new method for semi-automatic quantitative layer-by-layer measurement of protein expression and colocalisation in skin sections using the free open-source software CellProfiler. As a proof of principle, IF and isPLA of ichthyosis-related proteins TGm-1 and SDR9C7 were examined. The results indicate that this new method can be used for protein expression and colocalisation analysis in skin sections.<br /> (© 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.)
- Subjects :
- Epidermis metabolism
Gene Expression Profiling
Humans
Ichthyosis metabolism
Oxidoreductases metabolism
Pattern Recognition, Automated
Protein Processing, Post-Translational
Proteomics
Skin metabolism
Software
Transglutaminases metabolism
Image Processing, Computer-Assisted methods
Microscopy, Fluorescence
Skin pathology
Subjects
Details
- Language :
- English
- ISSN :
- 1600-0625
- Volume :
- 27
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- Experimental dermatology
- Publication Type :
- Report
- Accession number :
- 29094393
- Full Text :
- https://doi.org/10.1111/exd.13457