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Deinococcus petrolearius sp. nov. isolated from crude oil recovery water in China.
- Source :
-
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2018 Mar; Vol. 111 (3), pp. 353-360. Date of Electronic Publication: 2017 Oct 09. - Publication Year :
- 2018
-
Abstract
- A Gram-stain positive, non-motile, spherical, red-pigmented and facultatively anaerobic bacterium, designated strain 6.1 <superscript>T</superscript> , was isolated from a crude oil recovery water sample from the Huabei oil field in China. The novel strain exhibited tolerance of UV irradiation (> 1000 J m <superscript>-2</superscript> ). Based on 16S rRNA gene sequence comparisons, strain 6.1 <superscript>T</superscript> shows high similarity to Deinococcus citri DSM 24791 <superscript>T</superscript> (98.1%) and Deinococcus gobiensis I-0 <superscript>T</superscript> (97.8%), with less than 93.5% similarity to other closely related taxa. The major cellular fatty acids were identified as summed feature 3 (C <subscript>16:1</subscript> ω7c and/or iso-C <subscript>15:0</subscript> 2-OH), followed by iso-C <subscript>17:1</subscript> ω9c and C <subscript>16:0</subscript> . The polar lipid profile was found to contain phospholipids, glycolipids, phosphoglycolipids and aminophospholipids. The predominant respiratory quinone was identified as MK-8. The DNA G + C content was determined to be 68.3 mol %. DNA-DNA hybridization between strain 6.1 <superscript>T</superscript> and D. citri DSM 24791 <superscript>T</superscript> was 45.6 ± 7.1% and with D. gobiensis I-O <superscript>T</superscript> was 36.6 ± 4.7%. On the basis of phylogenetic, chemotaxonomic and phenotypic data, we conclude strain 6.1 <superscript>T</superscript> represents a novel species of the genus Deinococcus, for which we propose the name Deinococcus petrolearius sp. nov. The type strain is 6.1 <superscript>T</superscript> (= CGMCC 1.15053 <superscript>T</superscript>  = KCTC 33744 <superscript>T</superscript> ).
- Subjects :
- Bacterial Typing Techniques
Base Composition
China
Deinococcus chemistry
Deinococcus genetics
Deinococcus isolation & purification
Environmental Microbiology
Metabolomics methods
Phenotype
Phylogeny
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Deinococcus classification
Petroleum microbiology
Water Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1572-9699
- Volume :
- 111
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Antonie van Leeuwenhoek
- Publication Type :
- Academic Journal
- Accession number :
- 28993919
- Full Text :
- https://doi.org/10.1007/s10482-017-0957-9