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Phenylobacterium deserti sp. nov., isolated from desert soil.

Authors :
Khan IU
Hussain F
Habib N
Wadaan MAM
Ahmed I
Im WT
Hozzein WN
Zhi XY
Li WJ
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2017 Nov; Vol. 67 (11), pp. 4722-4727. Date of Electronic Publication: 2017 Oct 06.
Publication Year :
2017

Abstract

A novel bacterial strain, designated YIM 73061 <superscript>T</superscript> , was isolated from the Cholistan desert in Punjab, Pakistan, and characterized by using a polyphasic taxonomic approach. 16S rRNA gene sequence analysis revealed the highest levels of sequence similarity with respect to Phenylobacterium conjunctum FWC21 <superscript>T</superscript> (97.6 %), Phenylobacterium lituiforme FaiI3 <superscript>T</superscript> (97.4 %), Phenylobacteriumcomposti 4T-6 <superscript>T</superscript> (97.0 %) and Phenylobacterium aquaticum W2-3-4 <superscript>T</superscript> (96.8 %). Cells were Gram-stain-negative, aerobic and motile rods that formed orange colonies. The strain was oxidase- and catalase-positive. Growth occurred at 20-40 °C (optimum, 30-37 °C) at pH 5.0-8.0 (optimum, pH 7.0) and with 0-1 % (w/v) NaCl (optimum, 0-0.5 %). The major cellular fatty acids (>10 %) were summed feature 8 (comprising C18 : 1ω7c and/or C18 : 1ω6c) and C16 : 0. The polar lipid profile consisted of phosphatidylglycerol and four unidentified glycolipids. The major isoprenoid quinone was ubiquinone-10 (Q-10). The G+C content of the genomic DNA was 66.8 mol%. Strain YIM 73061 <superscript>T</superscript> showed low levels of DNA-DNA relatedness to P. conjunctum FWC21 <superscript>T</superscript> (27.2±2.6 %), P. lituiforme FaiI3 <superscript>T</superscript> (24.6±1.1 %) and P.composti 4T-6 <superscript>T</superscript> (18.4±3.1 %). On the basis of phylogenetic inference, chemotaxonomic characteristics and phenotypic data, strain YIM 73061 <superscript>T</superscript> should be classified as representing a novel species, for which the name Phenylobacterium deserti sp. nov. is proposed. The type strain is YIM 73061 <superscript>T</superscript> (=DSM 103871 <superscript>T</superscript> =CCTCC AB 2016297 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
67
Issue :
11
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
28984224
Full Text :
https://doi.org/10.1099/ijsem.0.002366