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Selecting of a cytochrome P450 cam SeSaM library with 3-chloroindole and endosulfan - Identification of mutants that dehalogenate 3-chloroindole.
- Source :
-
Biochimica et biophysica acta. Proteins and proteomics [Biochim Biophys Acta Proteins Proteom] 2018 Jan; Vol. 1866 (1), pp. 68-79. Date of Electronic Publication: 2017 Sep 18. - Publication Year :
- 2018
-
Abstract
- Cytochrome P450 <subscript>cam</subscript> (a camphor hydroxylase) from the soil bacterium Pseudomonas putida shows potential importance in environmental applications such as the degradation of chlorinated organic pollutants. Seven P450 <subscript>cam</subscript> mutants generated from Sequence Saturation Mutagenesis (SeSaM) and isolated by selection on minimal media with either 3-chloroindole or the insecticide endosulfan were studied for their ability to oxidize of 3-chloroindole to isatin. The wild-type enzyme did not accept 3-chloroindole as a substrate. Mutant (E156G/V247F/V253G/F256S) had the highest maximal velocity in the conversion of 3-chloroindole to isatin, whereas mutants (T56A/N116H/D297N) and (G60S/Y75H) had highest k <subscript>cat</subscript> /K <subscript>M</subscript> values. Six of the mutants had more than one mutation, and within this set, mutation of residues 297 and 179 was observed twice. Docking simulations were performed on models of the mutant enzymes; the wild-type did not accommodate 3-chloroindole in the active site, whereas all the mutants did. We propose two potential reaction pathways for dechlorination of 3-chloroindole. This article is part of a Special Issue entitled: Cytochrome P450 biodiversity and biotechnology, edited by Erika Plettner, Gianfranco Gilardi, Luet Wong, Vlada Urlacher, Jared Goldstone.<br /> (Copyright © 2017 Elsevier B.V. All rights reserved.)
- Subjects :
- Amino Acid Motifs
Amino Acid Substitution
Bacterial Proteins genetics
Bacterial Proteins metabolism
Binding Sites
Biodegradation, Environmental
Camphor 5-Monooxygenase genetics
Camphor 5-Monooxygenase metabolism
Cloning, Molecular
Endosulfan chemistry
Escherichia coli genetics
Escherichia coli metabolism
Gene Expression
Halogenation
Indoles chemistry
Isatin chemistry
Isatin metabolism
Kinetics
Molecular Docking Simulation
Mutation
Oxidation-Reduction
Protein Binding
Protein Interaction Domains and Motifs
Protein Structure, Secondary
Pseudomonas putida chemistry
Recombinant Proteins chemistry
Recombinant Proteins genetics
Recombinant Proteins metabolism
Substrate Specificity
Bacterial Proteins chemistry
Camphor 5-Monooxygenase chemistry
Endosulfan metabolism
Gene Library
Indoles metabolism
Pseudomonas putida enzymology
Subjects
Details
- Language :
- English
- ISSN :
- 1570-9639
- Volume :
- 1866
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Biochimica et biophysica acta. Proteins and proteomics
- Publication Type :
- Academic Journal
- Accession number :
- 28923662
- Full Text :
- https://doi.org/10.1016/j.bbapap.2017.09.006