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A meta-analysis of genome-wide association studies identifies 17 new Parkinson's disease risk loci.
- Source :
-
Nature genetics [Nat Genet] 2017 Oct; Vol. 49 (10), pp. 1511-1516. Date of Electronic Publication: 2017 Sep 11. - Publication Year :
- 2017
-
Abstract
- Common variant genome-wide association studies (GWASs) have, to date, identified >24 risk loci for Parkinson's disease (PD). To discover additional loci, we carried out a GWAS comparing 6,476 PD cases with 302,042 controls, followed by a meta-analysis with a recent study of over 13,000 PD cases and 95,000 controls at 9,830 overlapping variants. We then tested 35 loci (P < 1 × 10 <superscript>-6</superscript> ) in a replication cohort of 5,851 cases and 5,866 controls. We identified 17 novel risk loci (P < 5 × 10 <superscript>-8</superscript> ) in a joint analysis of 26,035 cases and 403,190 controls. We used a neurocentric strategy to assign candidate risk genes to the loci. We identified protein-altering or cis-expression quantitative trait locus (cis-eQTL) variants in linkage disequilibrium with the index variant in 29 of the 41 PD loci. These results indicate a key role for autophagy and lysosomal biology in PD risk, and suggest potential new drug targets for PD.
- Subjects :
- Antiparkinson Agents pharmacology
Autophagy genetics
Case-Control Studies
Genetic Predisposition to Disease
Humans
Linkage Disequilibrium
Lysosomes physiology
Molecular Targeted Therapy
Parkinson Disease drug therapy
Parkinson Disease epidemiology
Risk
Transcription Factors
Genome-Wide Association Study
Parkinson Disease genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1546-1718
- Volume :
- 49
- Issue :
- 10
- Database :
- MEDLINE
- Journal :
- Nature genetics
- Publication Type :
- Academic Journal
- Accession number :
- 28892059
- Full Text :
- https://doi.org/10.1038/ng.3955