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Considerations of developing an NGS assay for clinical applications in precision oncology: The NCI-MATCH NGS assay experience.
- Source :
-
Current problems in cancer [Curr Probl Cancer] 2017 May - Jun; Vol. 41 (3), pp. 201-211. - Publication Year :
- 2017
-
Abstract
- Next generation sequencing (NGS) technologies have been widely adapted in clinical oncology by utilizing the profiled genetic mutation information to select patients and to guide the choice of target therapy. To fulfill the regulatory compliance, development of an NGS assay that will be used in clinical trials requires an analytical validation to meet its intend clinical use. NCI-MATCH trial is the largest precision oncology basket trial which uses a single NGS assay (NCI-MATHC NGS assay) to screen the actionable mutations in 6000 patients, who have relapsed/refractory solid tumors and lymphomas after standard systemic treatment, and assigns matched treatment. This article reviews on the critical considerations during development and validation of NGS assays as an investigational device for genomic based clinical trials and provides the experiences from the development of NCI-MATCH NGS assay.<br /> (Copyright © 2017. Published by Elsevier Inc.)
- Subjects :
- Biopsy
Clinical Laboratory Services legislation & jurisprudence
Clinical Laboratory Services standards
Clinical Trials as Topic
Computational Biology
DNA Mutational Analysis methods
DNA Mutational Analysis standards
False Positive Reactions
Gene Expression Profiling methods
Gene Expression Profiling standards
Genetic Testing legislation & jurisprudence
Genetic Testing standards
Genomics legislation & jurisprudence
Genomics methods
Genomics standards
High-Throughput Nucleotide Sequencing
Humans
Molecular Targeted Therapy standards
Mutation
Neoplasms genetics
Patient Selection
Quality Control
Sensitivity and Specificity
Genetic Testing methods
Medical Oncology methods
Molecular Targeted Therapy methods
Neoplasms drug therapy
Precision Medicine methods
Subjects
Details
- Language :
- English
- ISSN :
- 1535-6345
- Volume :
- 41
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Current problems in cancer
- Publication Type :
- Academic Journal
- Accession number :
- 28625332
- Full Text :
- https://doi.org/10.1016/j.currproblcancer.2017.05.003