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Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor.

Authors :
O-Thong S
Khongkliang P
Mamimin C
Singkhala A
Prasertsan P
Birkeland NK
Source :
Genomics data [Genom Data] 2017 Feb 28; Vol. 12, pp. 49-51. Date of Electronic Publication: 2017 Feb 28 (Print Publication: 2017).
Publication Year :
2017

Abstract

Thermoanaerobacterium sp. strain PSU-2 was isolated from thermophilic hydrogen producing reactor and subjected to draft genome sequencing on 454 pyrosequencing and annotated on RAST. The draft genome sequence of strain PSU-2 contains 2,552,497 bases with an estimated G + C content of 35.2%, 2555 CDS, 8 rRNAs and 57 tRNAs. The strain had a number of genes responsible for carbohydrates metabolic, amino acids and derivatives, and protein metabolism of 17.7%, 14.39% and 9.81%, respectively. Strain PSU-2 also had gene responsible for hydrogen biosynthesis as well as the genes related to Ni-Fe hydrogenase. Comparative genomic analysis indicates strain PSU-2 shares about 94% genome sequence similarity with Thermoanaerobacterium xylanolyticum LX-11. The nucleotide sequence of this draft genome was deposited into DDBJ/ENA/GenBank under the accession MSQD00000000.

Details

Language :
English
ISSN :
2213-5960
Volume :
12
Database :
MEDLINE
Journal :
Genomics data
Publication Type :
Academic Journal
Accession number :
28337413
Full Text :
https://doi.org/10.1016/j.gdata.2017.02.012