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Multi-laboratory validation study of multilocus variable-number tandem repeat analysis (MLVA) for Salmonella enterica serovar Enteritidis, 2015.
- Source :
-
Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin [Euro Surveill] 2017 Mar 02; Vol. 22 (9). - Publication Year :
- 2017
-
Abstract
- Multilocus variable-number tandem repeat analysis (MLVA) is a rapid and reproducible typing method that is an important tool for investigation, as well as detection, of national and multinational outbreaks of a range of food-borne pathogens. Salmonella enterica serovar Enteritidis is the most common Salmonella serovar associated with human salmonellosis in the European Union/European Economic Area and North America. Fourteen laboratories from 13 countries in Europe and North America participated in a validation study for MLVA of S. Enteritidis targeting five loci. Following normalisation of fragment sizes using a set of reference strains, a blinded set of 24 strains with known allele sizes was analysed by each participant. The S. Enteritidis 5-loci MLVA protocol was shown to produce internationally comparable results as more than 90% of the participants reported less than 5% discrepant MLVA profiles. All 14 participating laboratories performed well, even those where experience with this typing method was limited. The raw fragment length data were consistent throughout, and the inter-laboratory validation helped to standardise the conversion of raw data to repeat numbers with at least two countries updating their internal procedures. However, differences in assigned MLVA profiles remain between well-established protocols and should be taken into account when exchanging data.<br /> (This article is copyright of The Authors, 2017.)
- Subjects :
- China epidemiology
Disease Outbreaks
Epidemiologic Studies
Europe epidemiology
Humans
Minisatellite Repeats
Multilocus Sequence Typing instrumentation
Multilocus Sequence Typing standards
Phylogeny
Predictive Value of Tests
Public Health Surveillance methods
Reproducibility of Results
Salmonella Food Poisoning epidemiology
Salmonella Infections epidemiology
Salmonella enteritidis classification
Laboratories statistics & numerical data
Molecular Typing methods
Multilocus Sequence Typing methods
Salmonella Infections microbiology
Salmonella enteritidis genetics
Salmonella enteritidis isolation & purification
Tandem Repeat Sequences genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1560-7917
- Volume :
- 22
- Issue :
- 9
- Database :
- MEDLINE
- Journal :
- Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin
- Publication Type :
- Academic Journal
- Accession number :
- 28277220
- Full Text :
- https://doi.org/10.2807/1560-7917.ES.2017.22.9.30477