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Spirosoma knui sp. nov., a radiation-resistant bacterium isolated from the Han River.
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2017 May; Vol. 67 (5), pp. 1359-1365. Date of Electronic Publication: 2017 May 30. - Publication Year :
- 2017
-
Abstract
- A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterium, designated 15J8-12T, was isolated from a water sample after exposure to 3 kGy of gamma radiation. The strain showed resistance to gamma radiation with a dose required to reduce the bacterial population 10 fold (D10) value of 4.7 kGy. The results of comparative 16S rRNA gene sequence analysis indicated that strain 15J8-12T represented a member of the family Cytophagaceae, phylum Bacteroidetes, and was most closely related to 'Spirosomafluminis' 15J17 (97.92 %) and Spirosoma arcticum R2-35T (92.22 %). The G+C content of the genomic DNA of 15J8-12T was 51.3 mol%. The detection of menaquinone MK-7 as the predominant respiratory quinone, a fatty acid profile with summed feature 3 (C16 : 1ω7c/C16 : 1ω6c; 40.5 %), C16 : 1ω5c (35.3 %), C15 : 0 iso (6.9 %) and C16 : 0 (6.8 %) as the major components and phosphatidylethanolamine as the major polar lipid also supported the affiliation of 15J8-12T with the genus Spirosoma. The DNA-DNA relatedness between 15J8-12T and 'Spirosoma fluminis' 15J17 was 27.8 %. On the basis of its phenotypic and genotypic properties, together with its phylogenetic distinctiveness, 15J8-12T should be considered to be a representative of a novel species of the genus Spirosoma, for which the name Spirosoma knui sp. nov. is proposed. The type strain is 15J8-12T (=KCTC 52510T=JCM 31407T).
- Subjects :
- Bacterial Typing Techniques
Base Composition
China
Cytophagaceae genetics
Cytophagaceae isolation & purification
DNA, Bacterial genetics
Fatty Acids chemistry
Gamma Rays
Nucleic Acid Hybridization
Phosphatidylethanolamines chemistry
RNA, Ribosomal, 16S genetics
Sequence Analysis, DNA
Vitamin K 2 analogs & derivatives
Vitamin K 2 chemistry
Cytophagaceae classification
Cytophagaceae radiation effects
Phylogeny
Rivers microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 67
- Issue :
- 5
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 28113041
- Full Text :
- https://doi.org/10.1099/ijsem.0.001817