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A scored human protein-protein interaction network to catalyze genomic interpretation.

Authors :
Li T
Wernersson R
Hansen RB
Horn H
Mercer J
Slodkowicz G
Workman CT
Rigina O
Rapacki K
Stærfeldt HH
Brunak S
Jensen TS
Lage K
Source :
Nature methods [Nat Methods] 2017 Jan; Vol. 14 (1), pp. 61-64. Date of Electronic Publication: 2016 Nov 28.
Publication Year :
2017

Abstract

Genome-scale human protein-protein interaction networks are critical to understanding cell biology and interpreting genomic data, but challenging to produce experimentally. Through data integration and quality control, we provide a scored human protein-protein interaction network (InWeb_InBioMap, or InWeb_IM) with severalfold more interactions (>500,000) and better functional biological relevance than comparable resources. We illustrate that InWeb_InBioMap enables functional interpretation of >4,700 cancer genomes and genes involved in autism.

Details

Language :
English
ISSN :
1548-7105
Volume :
14
Issue :
1
Database :
MEDLINE
Journal :
Nature methods
Publication Type :
Academic Journal
Accession number :
27892958
Full Text :
https://doi.org/10.1038/nmeth.4083