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SAPOVIRUSES IN CHILDREN WITH ACUTE GASTROENTERITIS FROM MANAUS , AMAZON REGION, BRAZIL, 2010-2011.
- Source :
-
Revista do Instituto de Medicina Tropical de Sao Paulo [Rev Inst Med Trop Sao Paulo] 2016 Nov 03; Vol. 58, pp. 81. Date of Electronic Publication: 2016 Nov 03. - Publication Year :
- 2016
-
Abstract
- Sapoviruses (SaVs) are responsible for acute gastroenteritis in humans, especially children and the elderly. In Brazil, data on SaVs infections are very limited, especially in Northern Brazil. Here, we investigated the occurrence of SaVs in samples from hospitalized children under ten years old that presented acute gastroenteritis. Positive samples were genotyped and phylogenetic analysis was performed using prototype strains sequences obtained from GenBank database. In total, 156 fecal samples were screened by RT-PCR for SaVs. A positivity rate of 3.8% (6/156) was found in children under three years of age. Four genotypes were detected: GI.I, GI.2 and GII.2?-GII.4?/GII.4, suggesting a possible inter-genotypes recombination. Most infections (83.3%) occurred between August and September. The positivity was similar to that found in other countries and genotyping demonstrated the presence of distinct genotypes. To our knowledge, this is the first study reporting the circulation of SaVs in Manaus, state of Amazonas, Amazon region, Brazil.
- Subjects :
- Acute Disease
Brazil epidemiology
Caliciviridae Infections diagnosis
Child
Child, Preschool
Feces virology
Gastroenteritis diagnosis
Gastroenteritis virology
Genotype
Humans
Phylogeny
Reverse Transcriptase Polymerase Chain Reaction
Sapovirus isolation & purification
Caliciviridae Infections epidemiology
Gastroenteritis epidemiology
Sapovirus genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1678-9946
- Volume :
- 58
- Database :
- MEDLINE
- Journal :
- Revista do Instituto de Medicina Tropical de Sao Paulo
- Publication Type :
- Academic Journal
- Accession number :
- 27828622
- Full Text :
- https://doi.org/10.1590/S1678-9946201658081