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Mariprofundus micogutta sp. nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a description of Mariprofundales ord. nov. and Zetaproteobacteria classis nov.

Authors :
Makita H
Tanaka E
Mitsunobu S
Miyazaki M
Nunoura T
Uematsu K
Takaki Y
Nishi S
Shimamura S
Takai K
Source :
Archives of microbiology [Arch Microbiol] 2017 Mar; Vol. 199 (2), pp. 335-346. Date of Electronic Publication: 2016 Oct 20.
Publication Year :
2017

Abstract

A novel iron-oxidizing chemolithoautotrophic bacterium, strain ET2 <superscript>T</superscript> , was isolated from a deep-sea sediment in a hydrothermal field of the Bayonnaise knoll of the Izu-Ogasawara arc. Cells were bean-shaped, curved short rods. Growth was observed at a temperature range of 15-30 °C (optimum 25 °C, doubling time 24 h) and a pH range of 5.8-7.0 (optimum pH 6.4) in the presence of NaCl at a range of 1.0-4.0 % (optimum 2.75 %). The isolate was a microaerophilic, strict chemolithoautotroph capable of growing using ferrous iron and molecular oxygen (O <subscript>2</subscript> ) as the sole electron donor and acceptor, respectively; carbon dioxide as the sole carbon source; and either ammonium or nitrate as the sole nitrogen source. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that the new isolate was related to the only previously isolated Mariprofundus species, M. ferrooxydans. Although relatively high 16S rRNA gene similarity (95 %) was found between the new isolate and M. ferrooxydans, the isolate was distinct in terms of cellular fatty acid composition, genomic DNA G+C content and cell morphology. Furthermore, genomic comparison between ET2 <superscript>T</superscript> and M. ferrooxydans PV-1 indicated that the genomic dissimilarity of these strains met the standard for species-level differentiation. On the basis of its physiological and molecular characteristics, strain ET2 <superscript>T</superscript> (= KCTC 15556 <superscript>T</superscript>  = JCM 30585 <superscript>T</superscript> ) represents a novel species of Mariprofundus, for which the name Mariprofundus micogutta is proposed. We also propose the subordinate taxa Mariprofundales ord. nov. and Zetaproteobacteria classis nov. in the phylum Proteobacteria.

Details

Language :
English
ISSN :
1432-072X
Volume :
199
Issue :
2
Database :
MEDLINE
Journal :
Archives of microbiology
Publication Type :
Academic Journal
Accession number :
27766355
Full Text :
https://doi.org/10.1007/s00203-016-1307-4