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Identification of further diversity among posaviruses.
- Source :
-
Archives of virology [Arch Virol] 2016 Dec; Vol. 161 (12), pp. 3541-3548. Date of Electronic Publication: 2016 Sep 12. - Publication Year :
- 2016
-
Abstract
- Recently, there have been reports of new members of posavirus-like viruses in the order Picornavirales. In this study, using a metagenomics approach, 11 posavirus-like sequences (>7,000 nucleotides) were detected in 155 porcine fecal samples. Phylogenetic analysis revealed that the newly identified virus sequences, together with other posavirus-like viruses, form distinct clusters within the order Picornavirales, composed of eight genogroups and unassigned sequences based on amino acid sequences of the helicase and RNA-dependent RNA polymerase regions, with <40 % and <50 % sequence identity, respectively. We propose further classifications of highly diverse posavirus populations based on newly identified sequences from Japanese pig feces.
Details
- Language :
- English
- ISSN :
- 1432-8798
- Volume :
- 161
- Issue :
- 12
- Database :
- MEDLINE
- Journal :
- Archives of virology
- Publication Type :
- Academic Journal
- Accession number :
- 27619795
- Full Text :
- https://doi.org/10.1007/s00705-016-3048-8