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PGD: a pangolin genome hub for the research community.

Authors :
Tan TK
Tan KY
Hari R
Mohamed Yusoff A
Wong GJ
Siow CC
Mutha NV
Rayko M
Komissarov A
Dobrynin P
Krasheninnikova K
Tamazian G
Paterson IC
Warren WC
Johnson WE
O'Brien SJ
Choo SW
Source :
Database : the journal of biological databases and curation [Database (Oxford)] 2016 Sep 11; Vol. 2016. Date of Electronic Publication: 2016 Sep 11 (Print Publication: 2016).
Publication Year :
2016

Abstract

Pangolins (order Pholidota) are the only mammals covered by scales. We have recently sequenced and analyzed the genomes of two critically endangered Asian pangolin species, namely the Malayan pangolin (Manis javanica) and the Chinese pangolin (Manis pentadactyla). These complete genome sequences will serve as reference sequences for future research to address issues of species conservation and to advance knowledge in mammalian biology and evolution. To further facilitate the global research effort in pangolin biology, we developed the Pangolin Genome Database (PGD), as a future hub for hosting pangolin genomic and transcriptomic data and annotations, and with useful analysis tools for the research community. Currently, the PGD provides the reference pangolin genome and transcriptome data, gene sequences and functional information, expressed transcripts, pseudogenes, genomic variations, organ-specific expression data and other useful annotations. We anticipate that the PGD will be an invaluable platform for researchers who are interested in pangolin and mammalian research. We will continue updating this hub by including more data, annotation and analysis tools particularly from our research consortium.Database URL: http://pangolin-genome.um.edu.my.<br /> (© The Author(s) 2016. Published by Oxford University Press.)

Details

Language :
English
ISSN :
1758-0463
Volume :
2016
Database :
MEDLINE
Journal :
Database : the journal of biological databases and curation
Publication Type :
Academic Journal
Accession number :
27616775
Full Text :
https://doi.org/10.1093/database/baw063