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Genetic variants in the receptor for advanced glycation end products (RAGE) gene were associated with circulating soluble RAGE level but not with renal function among Asians with type 2 diabetes: a genome-wide association study.
- Source :
-
Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association [Nephrol Dial Transplant] 2017 Oct 01; Vol. 32 (10), pp. 1697-1704. - Publication Year :
- 2017
-
Abstract
- Background: The soluble receptor for advanced glycation end products (sRAGE) has been shown to play an important role in diabetic complications. We conducted genome-wide association study (GWAS) of sRAGE in Asian type 2 diabetes mellitus (T2DM) patient and validated the association in an independent cohort of T2DM.<br />Methods: GWAS for sRAGE was performed in 2058 T2DM patients. Associations between single-nucleotide polymorphisms (SNPs) and plasma sRAGE level were analyzed in an additive model using a linear mixed model. To validate the associations, we performed de novo genotyping in an independent cohort (n = 1984). We selected the top SNP for assessment with diabetic kidney disease (DKD).<br />Results: The strongest SNP, rs2070600C>T (P = 1.21 × 10-52), was a genotyped, missense SNP located on chromosome 6, corresponding to the RAGE (AGER) gene locus, the gene encoding RAGE. Conditioning analysis on rs2070600 revealed that rs2071288C>T was the top genotyped independent SNP (P = 8.36 × 10-10). Both SNPs were strongly and dose-dependently correlated with sRAGE level (TT = 399.6 pg/mL, CT = 737.0 pg/mL and CC = 967.0 pg/mL, P < 0.001 for rs2070600; TT = 687.9 pg/mL, CT = 737.6 pg/mL and CC = 904.7 pg/mL, P < 0.001 for rs2072188). Both SNPs were robustly replicated in the independent cohort, especially among Chinese patients (P = 9.02 × 10-72 for rs2070600; P = 1.13 × 10-9 for rs2071288). Log-transformed sRAGE was associated with DKD after adjustment for age, gender and ethnicity in pooled cohorts [odds ratio 2.536 (95% confidence interval 1.864-3.450), P < 0.001]. However, we did not observe any significant association between rs2070600 and DKD.<br />Conclusions: Common variants in RAGE are strongly associated with plasma sRAGE level, which is associated with DKD. However, we did not find a causal link between sRAGE and renal function by Mendelian randomization.<br /> (© The Author 2016. Published by Oxford University Press on behalf of ERA-EDTA. All rights reserved.)
- Subjects :
- Adult
Aged
Aged, 80 and over
Alleles
Biomarkers analysis
Cohort Studies
Diabetes Mellitus, Type 2 blood
Diabetes Mellitus, Type 2 genetics
Diabetic Nephropathies etiology
Diabetic Nephropathies genetics
Female
Genotype
Humans
Kidney Function Tests
Male
Middle Aged
Young Adult
Antigens, Neoplasm genetics
Antigens, Neoplasm metabolism
Asian People genetics
Diabetes Mellitus, Type 2 complications
Diabetic Nephropathies diagnosis
Genome-Wide Association Study
Mitogen-Activated Protein Kinases genetics
Mitogen-Activated Protein Kinases metabolism
Polymorphism, Single Nucleotide
Subjects
Details
- Language :
- English
- ISSN :
- 1460-2385
- Volume :
- 32
- Issue :
- 10
- Database :
- MEDLINE
- Journal :
- Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association
- Publication Type :
- Academic Journal
- Accession number :
- 27448675
- Full Text :
- https://doi.org/10.1093/ndt/gfw263