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Characterization of the mantle transcriptome in bivalves: Pecten maximus, Mytilus edulis and Crassostrea gigas.
- Source :
-
Marine genomics [Mar Genomics] 2016 Jun; Vol. 27, pp. 9-15. Date of Electronic Publication: 2016 May 07. - Publication Year :
- 2016
-
Abstract
- The calcareous shells secreted by bivalve molluscs display diverse and species specific structural compositions, which indicates possible divergent biomineralization processes. Thus, studying multiple mollusc species will provide a more comprehensive understanding of shell formation. Here, the transcriptomes of the mantle tissues responsible for shell deposition were characterized in three commercially relevant bivalve species. Using high-throughput sequencing and bioinformatics tools, de novo transcriptome assemblies of mantle tissues were generated for the mussel Mytilus edulis, the oyster Crassostrea gigas and the scallop Pecten maximus. These transcriptomes were annotated, and contigs with similarity to proteins known to have shell formation roles in other species were identified. Comparison of the shell formation specific proteins in the three bivalves indicates the possibility of species specific shell proteins.<br /> (Copyright © 2016 Elsevier B.V. All rights reserved.)
- Subjects :
- Animal Shells growth & development
Animals
Calcification, Physiologic
Crassostrea genetics
Crassostrea growth & development
Crassostrea metabolism
Mytilus edulis genetics
Mytilus edulis growth & development
Mytilus edulis metabolism
Pecten growth & development
Pecten metabolism
Scotland
Sequence Analysis, Protein
Pecten genetics
Transcriptome
Subjects
Details
- Language :
- English
- ISSN :
- 1876-7478
- Volume :
- 27
- Database :
- MEDLINE
- Journal :
- Marine genomics
- Publication Type :
- Academic Journal
- Accession number :
- 27160853
- Full Text :
- https://doi.org/10.1016/j.margen.2016.04.003