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Homology model, molecular dynamics simulation and novel pyrazole analogs design of Candida albicans CYP450 lanosterol 14 α-demethylase, a target enzyme for antifungal therapy.
- Source :
-
Journal of biomolecular structure & dynamics [J Biomol Struct Dyn] 2017 May; Vol. 35 (7), pp. 1446-1463. Date of Electronic Publication: 2016 Aug 02. - Publication Year :
- 2017
-
Abstract
- Candida albicans infections and their resistance to clinically approved azole drugs are major concerns for human. The azole antifungal drugs inhibit the ergosterol synthesis by targeting lanosterol 14α-demethylase of cytochrome P450 family. The lack of high-resolution structural information of fungal pathogens has been a barrier for the design of modified azole drugs. Thus, a preliminary theoretical molecular dynamic study is carried out to develop and validate a simple homologous model using crystallographic structure of the lanosterol 14α-demethylase of Mycobacterium tuberculosis (PDB ID-1EA1) in which the active site residues are substituted with that of C. albicans (taxid 5476). Further, novel designed pyrazole analogs (SGS1-16) docked on chimeric 1EA1 and revealed that SGS-16 show good binding affinity through non-bonding interaction with the heme, which is different from the leading azole antifungals. The ADME-T results showed these analogs can be further explored in design of more safe and effective antifungal agents.
- Subjects :
- 14-alpha Demethylase Inhibitors chemical synthesis
Amino Acid Sequence
Antifungal Agents chemical synthesis
Bacterial Proteins chemistry
Bacterial Proteins genetics
Bacterial Proteins metabolism
Candida albicans chemistry
Candida albicans genetics
Catalytic Domain
Crystallography, X-Ray
Fungal Proteins genetics
Fungal Proteins metabolism
Gene Expression
Molecular Docking Simulation
Molecular Dynamics Simulation
Mycobacterium tuberculosis chemistry
Mycobacterium tuberculosis enzymology
Mycobacterium tuberculosis genetics
Protein Binding
Protein Conformation, alpha-Helical
Protein Conformation, beta-Strand
Protein Interaction Domains and Motifs
Pyrazoles chemical synthesis
Recombinant Fusion Proteins genetics
Recombinant Fusion Proteins metabolism
Sequence Alignment
Sterol 14-Demethylase genetics
Sterol 14-Demethylase metabolism
Structural Homology, Protein
Thermodynamics
14-alpha Demethylase Inhibitors chemistry
Antifungal Agents chemistry
Candida albicans enzymology
Fungal Proteins chemistry
Pyrazoles chemistry
Recombinant Fusion Proteins chemistry
Sterol 14-Demethylase chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1538-0254
- Volume :
- 35
- Issue :
- 7
- Database :
- MEDLINE
- Journal :
- Journal of biomolecular structure & dynamics
- Publication Type :
- Academic Journal
- Accession number :
- 27142238
- Full Text :
- https://doi.org/10.1080/07391102.2016.1185380